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setup.py
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setup.py
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#
# MarkovModels setuptools script
#
import os
from setuptools import find_packages, setup
# Load text for description
with open('README.md') as f:
readme = f.read()
# Load version number
#with open(os.path.join('MarkovModels', 'version.txt'), 'r') as f:
# version = f.read()
version = "0"
# Go!
setup(
# Module name (lowercase)
name='MarkovModels',
version=version,
description='markov models for cardiac modelling',
long_description=readme,
long_description_content_type="text/markdown",
author='Joseph Shuttleworth, Dominic Whittaker, Michael Clerx, Maurice Hendrix, Gary Mirams',
author_email='joseph.shuttleworth@nottingham.ac.uk',
maintainer='Joseph Shuttleworth',
maintainer_email='joseph.shuttleworth@nottingham.ac.uk',
url='https://github.com/joeyshuttleworth/MarkovModels',
classifiers=[
"Programming Language :: Python :: 3",
"License :: OSI Approved :: BSD License",
"Operating System :: OS Independent",
],
# Packages to include
packages=find_packages(
include=('MarkovModels', 'MarkovModels.*')),
# Include non-python files (via MANIFEST.in)
include_package_data=True,
# Required Python version
python_requires='>=3.6',
# List of dependencies
install_requires=[
'pints==0.4.0',
'scipy==1.9.1',
'numpy==1.23.5',
'matplotlib==3.6.2',
'pandas==1.5.0',
'sympy==1.11.1',
'numba==0.56.2',
'regex==2022.9.13',
'myokit==1.33.0',
'seaborn==0.12.0',
'openpyxl==3.1.2',
'markov_builder @ git+https://git@github.com/CardiacModelling/Markov-builder@8193d0f10795119e032ee9e458e15f60318594f4',
'scikit-build==0.16.7',
'numbalsoda @ git+https://git@github.com/NicholasWogan/numbalsoda@c9183b5bc75002bac5270339f0e0ca645f102b4d'
],
extras_require={
'test': [
'pytest-cov>=2.10', # For coverage checking
'pytest>=4.6', # For unit tests
'flake8>=3', # For code style checking
'isort',
'mock>=3.0.5', # For mocking command line args etc.
'codecov>=2.1.3',
],
},
)