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calculation error while computing haralick features for a set of images #1116

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me-nobody opened this issue Jun 25, 2024 · 1 comment · Fixed by #1122
Closed

calculation error while computing haralick features for a set of images #1116

me-nobody opened this issue Jun 25, 2024 · 1 comment · Fixed by #1122

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@me-nobody
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image
predict_nuclei_multiple-118519_err.txt
predicted_label
Hi,
for a set of images, when I used histomicsTK, it threw a calculation error. Can you please tell me how to overcome this error. I have uploaded the image, the label image and the error.
Best
Anu
manthey added a commit that referenced this issue Aug 1, 2024
@manthey
Harden haralick computation.
ead2ece 
Should resolve #1116.
@manthey manthey mentioned this issue Aug 1, 2024
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@manthey
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manthey commented Aug 1, 2024

It looks like this happens with some floating point rounding errors. I added a PR that guards against it.

@manthey manthey closed this as completed in 4e2e2eb Aug 1, 2024
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Harden haralick computation. DigitalSlideArchive/HistomicsTK
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@me-nobody @manthey