- Make sure you have Sphinx installed.
- Install the sctools package in advance following the instructions.
- From the current directory (/docs/), type:
make target
where target
is one of {html, epub, latex, ...}. For more details about the sphinx builders, check here
Note that there are still some bugs to be worked out.
- There are warnings about:
WARNING: [autosummary] failed to import 'sctools.metrics.CellMetrics': no module named sctools.metrics.CellMetrics
WARNING: [autosummary] failed to import 'sctools.metrics.GeneMetrics': no module named sctools.metrics.GeneMetrics
WARNING: [autosummary] failed to import 'sctools.metrics.MetricAggregatorBase': no module named sctools.metrics.MetricAggregatorBase
- There are a bunch of warnings:
WARNING: Unexpected section title.
- There are a bunch of warnings:
WARNING: toctree contains reference to nonexisting document
Most of the warnings can be solved by refactoring the docstrings and standardize the usages of autosummary
later.