Compile list of data/knowledge sources being used by RTX

[inter-apero-bility]

@saramsey Per our discussion at the 2018-04-30 RTX meeting, the NSF EAGER award I am applying for specifically highlights the reuse of data created as a product of NSF-funded research. A list of data/knowledge sources RTX is implementing/ingesting in the knowledge graph/reasoning tool would be helpful to understand what - if any - of these accord with the aforementioned stipulation.

[saramsey]

yes, Monarch is NSF supported. NSF-DEB-0956049

https://academic.oup.com/nar/article/45/D1/D712/2605791

[saramsey]

Confirmed: COHD (cohd.nsides.io) is not NSF funded.

[saramsey]

Reactome: The "Plant Reactome" is funded by NSF. https://www.nsf.gov/awardsearch/showAward?AWD_ID=1127112

but we are not really using any plant data from Reactome

[saramsey]

UniProt is NSF funded: DBI-1062520

https://www.uniprot.org/help/about

[saramsey]

ChEMBL is probably not NSF funded (it is a European database)

[inter-apero-bility]

Thanks @saramsey ! This is great for the purposes of the one-pager, which I will circulate to RTX by EOD.

[saramsey]

GeneProf is probably not NSF supported; they are in the UK

[saramsey]

EBIOLS is probably not NFS supported; they are in Germany & UK

[saramsey]

SemMedDB is partly NSF supported:
https://ischool.illinois.edu/articles/2017/04/schneider-receives-xsede-start-up-award