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Clean Up Files #395

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Anselmoo
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Fixes #394

- Remove all `.gitignores` in subfolders
- Add `.gitignores` patterns for MacOS, Windows, and Linux
- Add `.gitignores` patterns for python, Julia, C, C++
- `end-of-file-fixer`
- `trailing-whitespace`
- `check-merge-conflict`
@Anselmoo
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@RagnarB83 If there are too many changes, you can remove them with git revert <commit> or git rebase -i.

@RagnarB83
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Due to merge conflicts after restructuring of repo, this one no longer works.
But no longer needed due to #409 (same precommit commands).
Thanks.

@RagnarB83 RagnarB83 closed this Jan 26, 2024
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🧹 Cleanup files and structure
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