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Define guidelines for the units #3

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SilasK opened this issue Jan 17, 2018 · 1 comment
Open

Define guidelines for the units #3

SilasK opened this issue Jan 17, 2018 · 1 comment

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@SilasK
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SilasK commented Jan 17, 2018

Hey, thank you for this valuable resources.

I recommend to define guidelines for the keywords to put in the rules and their units of time, memory...
Otherwise switching from one profile to the other would need to adapt all resource items in the Snakefile or do create a new snakemake-profile.

what do you think?
@johanneskoester
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I totally agree, but there will (hopefully soon) be support for resource units in Snakemake itself, see here.

@johanneskoester johanneskoester mentioned this issue Feb 9, 2018
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@johanneskoester @SilasK