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Commits on Jan 15, 2024

• Included Slicer 5.6 presets file to show ASTRA volumes in 3d visualization. No need for MATLAB visualization then.

  amithjkamath

  committedJan 15, 2024
  d3dfa26

Commits on Dec 5, 2023

• Show target as well in the 3d plot. minor change - this will go into rtqa-rating-tool as is.

  amithjkamath

  committedDec 5, 2023
  dd245f6

Commits on Nov 30, 2023

• Renamed folders; now can generate astra-like maps using python and visualize with pyvista. Can do better with occlusion - working on that next.

  amithjkamath

  committedNov 30, 2023
  242e1a8

• Testing out visualization libraries - also moved MATLAB content into separate folder to avoid confusion. Testing pyvista more next.

  amithjkamath

  committedNov 30, 2023
  72604d4

• Fixed minor bugs in cascaded version - should now run with no issues with wandb.

  amithjkamath

  committedNov 30, 2023
  9534add

• Fixed duplication - dataloader now depends on utils. Also added wandb for tracking experiments.

  amithjkamath

  committedNov 30, 2023
  c9d5163

Commits on Nov 29, 2023

• Reasonably good training behavior for both cascaded and standard UNet for regression tasks - need to evaluate and visualize next.

  amithjkamath

  committedNov 29, 2023
  d0bf8c1

Commits on Nov 28, 2023

• Created netron visualizations - updated requirements with onnx.

  amithjkamath

  committedNov 28, 2023
  3567c71

• Working version of monai unet training - need to check evaluation. CascadedUNet is also working - need to test.

  amithjkamath

  committedNov 28, 2023
  3dabf56

• Many more movements of files - working on utils folder clean up at the moment.

  amithjkamath

  committedNov 28, 2023
  26d4f3e

• Clean up and rename files - more cleanup in utils to come next.

  amithjkamath

  committedNov 28, 2023
  e062788

Commits on Nov 24, 2023

• Version of MONAI model + DLDP data. Need to fix loss computation bug.

  amithjkamath

  committedNov 24, 2023
  eb06211

• More updates on architecture - now can train on CPU; testing with small dataset. Also updates to MONAI model.

  amithjkamath

  committedNov 24, 2023
  40780b7

• Working version of the inference code; updated paths for the perturb version;

  amithjkamath

  committedNov 24, 2023
  0c883cf

Commits on Apr 7, 2023

• initial version of monai for cascaded UNet

  amithjkamath

  committedApr 7, 2023
  9b874cd

Commits on Apr 4, 2023

• MONAI version of cascaded UNet; different from C3D

  amithjkamath

  committedApr 4, 2023
  2859eac

Commits on Apr 3, 2023

• update to allow for target ASTRA

  amithjkamath

  committedApr 3, 2023
  5825a52

Commits on Feb 27, 2023

• visualization changes: created some videos

  amithjkamath

  committedFeb 27, 2023
  1ca9318

• more cleanup and movement;

  amithjkamath

  committedFeb 27, 2023
  7bfda59

• update to README; slight cleanup

  amithjkamath

  committedFeb 27, 2023
  b7b6484

Commits on Feb 10, 2023

• added notebook for analysis.

  amithjkamath

  committedFeb 10, 2023
  f34f0e4

Commits on Feb 9, 2023

• removed older files.

  amithjkamath

  committedFeb 9, 2023
  22df8a9

• incremental updates - still WIP. updating deep-planner to astra

  amithjkamath

  committedFeb 9, 2023
  8427de5

Commits on Feb 8, 2023

• Initial commit. This will be the EMBC repo going forward.

  amithjkamath

  committedFeb 8, 2023
  337504e

• Initial commit

  amithjkamath

  authoredFeb 8, 2023
  b014901