From b1c5385c4fe2108e30eb2f111859512d5433186f Mon Sep 17 00:00:00 2001 From: Devon Ryan Date: Sat, 15 Jul 2023 12:23:22 +0200 Subject: [PATCH] fix: update pinning for libxml2 due to conda-forge migration --- bioconda_utils/bioconda_utils-conda_build_config.yaml | 7 +++++++ 1 file changed, 7 insertions(+) diff --git a/bioconda_utils/bioconda_utils-conda_build_config.yaml b/bioconda_utils/bioconda_utils-conda_build_config.yaml index c1bcabcb19..64f9a5e2dc 100644 --- a/bioconda_utils/bioconda_utils-conda_build_config.yaml +++ b/bioconda_utils/bioconda_utils-conda_build_config.yaml @@ -32,6 +32,13 @@ bamtools: r_base: - "4.3.*" +# Note: this is a (hopefully) temporary fix for the r-base 4.3 migration. That package was built +# with libxml2 2.11, but that migration on conda-forge isn't yet complete. Consequently conda-forge-pinning +# still has libxml2 2.10. That means that there are a number of R and Bioconductor packages we can't currently +# build without manually changing out libxml2 pinning. +libxml2: + - "2.11.*" + python: - 3.10.* *_cpython - 3.9.* *_cpython