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get genomic_pos data from NCBI? #50

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newgene opened this issue Aug 15, 2018 · 2 comments
Open

get genomic_pos data from NCBI? #50

newgene opened this issue Aug 15, 2018 · 2 comments

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@newgene
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newgene commented Aug 15, 2018

Currently, our genomic_pos and genomic_pos_hg19 fields are coming from Ensembl, therefore, only available for those species included in Ensembl release.

We should find out a good data source from NCBI for the genomic position data, hopefully, cover more species.

@pwwang
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pwwang commented Aug 15, 2018

Or UCSC genome browser?

@newgene
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newgene commented Aug 15, 2018

I hope NCBI will cover more species than those included in UCSC genome browser. But, yes, if needed, we can get the data from UCSC as well.

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