diff --git a/apm/package-lock.json b/apm/package-lock.json
index 277fe031486..53286df09a0 100644
--- a/apm/package-lock.json
+++ b/apm/package-lock.json
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-          "resolved": "http://registry.npmjs.org/readable-stream/-/readable-stream-1.1.14.tgz",
+          "resolved": "https://registry.npmjs.org/readable-stream/-/readable-stream-1.1.14.tgz",
           "integrity": "sha1-fPTFTvZI44EwhMY23SB54WbAgdk=",
           "requires": {
             "core-util-is": "~1.0.0",
@@ -4109,9 +3970,9 @@
           },
           "dependencies": {
             "glob": {
-              "version": "7.1.3",
-              "resolved": "https://registry.npmjs.org/glob/-/glob-7.1.3.tgz",
-              "integrity": "sha512-vcfuiIxogLV4DlGBHIUOwI0IbrJ8HWPc4MU7HzviGeNho/UJDfi6B5p3sHeWIQ0KGIU0Jpxi5ZHxemQfLkkAwQ==",
+              "version": "7.1.4",
+              "resolved": "https://registry.npmjs.org/glob/-/glob-7.1.4.tgz",
+              "integrity": "sha512-hkLPepehmnKk41pUGm3sYxoFs/umurYfYJCerbXEyFIWcAzvpipAgVkBqqT9RBKMGjnq6kMuyYwha6csxbiM1A==",
               "requires": {
                 "fs.realpath": "^1.0.0",
                 "inflight": "^1.0.4",
@@ -4145,7 +4006,7 @@
           "dependencies": {
             "async": {
               "version": "1.5.2",
-              "resolved": "http://registry.npmjs.org/async/-/async-1.5.2.tgz",
+              "resolved": "https://registry.npmjs.org/async/-/async-1.5.2.tgz",
               "integrity": "sha1-7GphrlZIDAw8skHJVhjiCJL5Zyo="
             },
             "coffee-script": {
@@ -4237,7 +4098,7 @@
         },
         "strip-ansi": {
           "version": "3.0.1",
-          "resolved": "http://registry.npmjs.org/strip-ansi/-/strip-ansi-3.0.1.tgz",
+          "resolved": "https://registry.npmjs.org/strip-ansi/-/strip-ansi-3.0.1.tgz",
           "integrity": "sha1-ajhfuIU9lS1f8F0Oiq+UJ43GPc8=",
           "requires": {
             "ansi-regex": "^2.0.0"
@@ -4301,7 +4162,7 @@
             },
             "readable-stream": {
               "version": "2.3.6",
-              "resolved": "http://registry.npmjs.org/readable-stream/-/readable-stream-2.3.6.tgz",
+              "resolved": "https://registry.npmjs.org/readable-stream/-/readable-stream-2.3.6.tgz",
               "integrity": "sha512-tQtKA9WIAhBF3+VLAseyMqZeBjW0AHJoxOtYqSUZNJxauErmLbVm2FW1y+J/YA9dUrAC39ITejlZWhVIwawkKw==",
               "requires": {
                 "core-util-is": "~1.0.0",
@@ -4334,7 +4195,7 @@
           "dependencies": {
             "rimraf": {
               "version": "2.2.8",
-              "resolved": "http://registry.npmjs.org/rimraf/-/rimraf-2.2.8.tgz",
+              "resolved": "https://registry.npmjs.org/rimraf/-/rimraf-2.2.8.tgz",
               "integrity": "sha1-5Dm+Kq7jJzIZUnMPmaiSnk/FBYI="
             }
           }
@@ -4445,14 +4306,6 @@
             "extsprintf": "^1.2.0"
           }
         },
-        "which": {
-          "version": "1.3.1",
-          "resolved": "https://registry.npmjs.org/which/-/which-1.3.1.tgz",
-          "integrity": "sha512-HxJdYWq1MTIQbJ3nw0cqssHoTNU267KlrDuGZ1WYlxDStUtKUhOaJmh112/TZmHxxUfuJqPXSOm7tDyas0OSIQ==",
-          "requires": {
-            "isexe": "^2.0.0"
-          }
-        },
         "which-pm-runs": {
           "version": "1.0.0",
           "resolved": "https://registry.npmjs.org/which-pm-runs/-/which-pm-runs-1.0.0.tgz",
@@ -4478,7 +4331,7 @@
         },
         "wrap-ansi": {
           "version": "2.1.0",
-          "resolved": "http://registry.npmjs.org/wrap-ansi/-/wrap-ansi-2.1.0.tgz",
+          "resolved": "https://registry.npmjs.org/wrap-ansi/-/wrap-ansi-2.1.0.tgz",
           "integrity": "sha1-2Pw9KE3QV5T+hJc8rs3Rz4JP3YU=",
           "requires": {
             "string-width": "^1.0.1",
@@ -4517,7 +4370,7 @@
         },
         "yargs": {
           "version": "3.32.0",
-          "resolved": "http://registry.npmjs.org/yargs/-/yargs-3.32.0.tgz",
+          "resolved": "https://registry.npmjs.org/yargs/-/yargs-3.32.0.tgz",
           "integrity": "sha1-AwiOnr+edWtpdRYR0qXvWRSCyZU=",
           "requires": {
             "camelcase": "^2.0.1",
diff --git a/apm/package.json b/apm/package.json
index b12026f6100..8455dc7be6d 100644
--- a/apm/package.json
+++ b/apm/package.json
@@ -6,6 +6,6 @@
     "url": "https://github.com/atom/atom.git"
   },
   "dependencies": {
-    "atom-package-manager": "2.1.7"
+    "atom-package-manager": "2.2.2"
   }
 }
diff --git a/script/lib/run-apm-install.js b/script/lib/run-apm-install.js
index 982ed7165cb..4a1511c0c42 100644
--- a/script/lib/run-apm-install.js
+++ b/script/lib/run-apm-install.js
@@ -13,7 +13,7 @@ module.exports = function (packagePath, ci, stdioOptions) {
   installEnv.npm_config_target = CONFIG.appMetadata.electronVersion
   childProcess.execFileSync(
     CONFIG.getApmBinPath(),
-    ['--loglevel=error', ci ? 'ci' : 'install'],
+    [ci ? 'ci' : 'install'],
     {env: installEnv, cwd: packagePath, stdio: stdioOptions || 'inherit'}
   )
 }
diff --git a/script/package-lock.json b/script/package-lock.json
index 0b73bd8d577..0eea9faf6a1 100644
--- a/script/package-lock.json
+++ b/script/package-lock.json
@@ -693,7 +693,6 @@
       "version": "0.4.2",
       "resolved": "https://registry.npmjs.org/boom/-/boom-0.4.2.tgz",
       "integrity": "sha1-emNune1O/O+xnO9JR6PGffrukRs=",
-      "optional": true,
       "requires": {
         "hoek": "0.9.x"
       }
@@ -3425,8 +3424,7 @@
     "hoek": {
       "version": "0.9.1",
       "resolved": "https://registry.npmjs.org/hoek/-/hoek-0.9.1.tgz",
-      "integrity": "sha1-PTIkYrrfB3Fup+uFuviAec3c5QU=",
-      "optional": true
+      "integrity": "sha1-PTIkYrrfB3Fup+uFuviAec3c5QU="
     },
     "home-or-tmp": {
       "version": "1.0.0",