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I use bwa to map the reads to new_draft_01.fa , the commands like this ,../../bwa-0.7.17/bwa mem -t 12 -x ont2d new_draft_01.fa crabA_nano_pass.fastq |../../samtools-1.9/bin/samtools view -@ 12 -b -o draft1_map.bam ,I checked the result , it generate draft1_map.bam yesterday 3pm . since the ,no new output from the bam file . The other bam files also stopped . So can I stop it running now and go on next . By the way , the genome is 1 G , the sequencing data is ~200G , and I have run the bwa for 5 days .
The text was updated successfully, but these errors were encountered:
I use bwa to map the reads to new_draft_01.fa , the commands like this ,
../../bwa-0.7.17/bwa mem -t 12 -x ont2d new_draft_01.fa crabA_nano_pass.fastq |../../samtools-1.9/bin/samtools view -@ 12 -b -o draft1_map.bam
,I checked the result , it generate draft1_map.bam yesterday 3pm . since the ,no new output from the bam file . The other bam files also stopped . So can I stop it running now and go on next . By the way , the genome is 1 G , the sequencing data is ~200G , and I have run the bwa for 5 days .The text was updated successfully, but these errors were encountered: