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Thank you for developing GALA. I have a problem with newgenome as follows.
$ /media/Users/src/GALA/newgenome drafts.txt gathering
Traceback (most recent call last):
File "/media/Users/src/GALA/newgenome", line 28, in <module>
genomes(genomes=draft,gathering=gathering,gathering_name=name,outpath=output)
File "/media/Users/src/GALA/src/new_genome.py", line 82, in genomes
b=new_genome(cut_file=gathering+gathering_name+'_'+a+'_cuts.txt',old_genome=aa,out_path=outpath,name='new_'+a)
File "/media/Users/src/GALA/src/new_genome.py", line 48, in new_genome
i[base+'_'+str(h)+'_'+'awad']=e[base][int(g[j]):int(g[j+1])]
ValueError: invalid literal for int() with base 10: '6067162.0'
Single command mode throws a similar error.
The content of gathering/gathering_draft_01_cuts.txt:
Hello,
Thank you for developing GALA. I have a problem with
newgenome
as follows.Single command mode throws a similar error.
The content of
gathering/gathering_draft_01_cuts.txt
:I edited the
*_cuts.txt
files as all float values were trucated to integer values:Then
newgenome
exited successfully. However, will the final result be expected?Best
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