This repository has been archived by the owner on Sep 12, 2018. It is now read-only.

Commits

Commits on Jul 11, 2015

Minor fix to network name format (now extension is required).
ggirelli-test
committedJul 11, 2015
Implemented high-level graph intersect function.
ggirelli-test
committedJul 11, 2015
Fixed reference errors.
ggirelli-test
committedJul 11, 2015
Fixed repeated typo.
ggirelli-test
committedJul 11, 2015
Merge branch 'master' of https://github.com/ggirelli/tepp
ggirelli-test
committedJul 11, 2015
Adding cleanVertices option, to remove singletons.
ggirelli-test
committedJul 11, 2015

Commits on Jun 25, 2015

Implemented subtract high-level operation.
ggirelli-test
committedJun 25, 2015

Commits on Jun 18, 2015

Fixed bugs in the high-level network merge function and implemented high-level network subtract function. The e_behavior and n_behavior features are not implemented yet in the subtract function.
ggirelli-test
committedJun 18, 2015

Commits on Jun 15, 2015

Implemented high-level merge function and optimized some functions adding the option for parallel computation.
ggirelli-test
committedJun 15, 2015

Commits on Jun 12, 2015

Added option to compute co-occurrency of all the possible aberration couples without limiting it to the aberrations in the dependency graph.\
ggirelli-test
committedJun 12, 2015

Commits on Mar 10, 2015

Minor update
ggirelli-test
committedMar 10, 2015
Updated configuration file.
ggirelli-test
committedMar 10, 2015

Commits on Mar 9, 2015

Log
ggirelli-test
committedMar 9, 2015
Fixed.
ggirelli-test
committedMar 9, 2015
Fixed error.
ggirelli-test
committedMar 9, 2015
Fixing duplicated genes removal.
ggirelli-test
committedMar 9, 2015

Commits on Feb 13, 2015

Debugging GB.
ggirelli-test
committedFeb 13, 2015

Commits on Feb 10, 2015

Commits on Feb 9, 2015

Commits on Feb 6, 2015

Set mc.preschedule=F
ggirelli-test
committedFeb 6, 2015
Minor edit
ggirelli-test
committedFeb 6, 2015
rm parentDir scripts
ggirelli-test
committedFeb 6, 2015
Fixed source path in GB class.
ggirelli-test
committedFeb 6, 2015
Use NA in file.list when excluding a certain aberration type.
ggirelli-test
committedFeb 6, 2015
Alwasy declare all the parameters in the config.R file.
ggirelli-test
committedFeb 6, 2015
Removed ifelse construct.
ggirelli-test
committedFeb 6, 2015
Fixed bug in ifelse conditions.
ggirelli-test
committedFeb 6, 2015
Fixed minor bug.
ggirelli-test
committedFeb 6, 2015
Updated Version
ggirelli-test
committedFeb 6, 2015
Minor edit.
ggirelli-test
committedFeb 6, 2015