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Issues list

Error in (function (cond) : error in evaluating the argument 'x' in selecting a method for function 't': subscript out of bounds
#56 by ChengHsiangLu was closed Nov 8, 2022
1
Problem while computing `cnv_state_post = ...[]
#31 by MigleMi was closed May 18, 2022
3
long vectors not supported yet
#32 by josegarciamanteiga was closed May 17, 2022
5
Error: Must group by variables found in .data. * Column seg is not found. * Column sample is not found. When analyzing two samples bound together
#33 by josegarciamanteiga was closed Jul 5, 2022
7
Memory usage, tidyverse copy-on-modify and mclapply enhancement New feature or request
#34 by whtns was closed Jul 22, 2022
2
CNVs are not detected
#44 by ccruizm was closed Oct 5, 2022
4
Generate single-cell likelihoods for a pre-specified CNV enhancement New feature or request
#45 by tobyaicher was closed Apr 2, 2023
3
Issue during detect_clonal_loh()
#46 by Thapeachydude was closed Oct 10, 2022
1
Roxygen2 documentation
#1 by evanbiederstedt was closed Apr 22, 2022
4
Error during 2. Iteration [multiplexing]
#49 by Thapeachydude was closed Nov 15, 2022
9
Error during 1. Iteration
#50 by Moxinwu was closed Nov 1, 2022
4
Generate count_mat with Bulk RNA-seq data
#53 by ChengHsiangLu was closed Nov 4, 2022
4
"No CNV remains after filtering" using default settings on 10x lymphoma data
#55 by juliashay was closed Nov 9, 2022
4
Compatible with mouse data?
#15 by zqzneptune was closed Feb 21, 2022
@hiraksarkar @teng-gao
7
Barcodes pileup_and_phase
#57 by petrsh was closed Nov 9, 2022
1
No CNV remains after filtering
#58 by petrsh was closed Nov 18, 2022
5
Majority of cells predicted as tumor cells
#59 by petrsh was closed Nov 18, 2022
Running numbat on merged bam [smart-seq]
#60 by Laolga was closed Nov 17, 2022
3
Compatibility with Probe based chemistry
#48 by afvallejo was closed Oct 13, 2022
1
replace bedr in preprocess_allele
#3 by teng-gao was closed Dec 27, 2021
Too many color legend being shown
#4 by teng-gao was closed Dec 26, 2021
Warning in geom_point
#5 by hiraksarkar was closed Feb 12, 2022
3
Christophe's comments
#9 by teng-gao was closed Feb 17, 2022
8 tasks done
2
perform_nni uses too much memory
#13 by teng-gao was closed Mar 20, 2022
2
Informative error handling for users
#14 by evanbiederstedt was closed Apr 22, 2022
@hiraksarkar @teng-gao
ProTip! Exclude everything labeled bug with -label:bug.