Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Add an option to control hdf5 storage chunk size #9

Open
lentendu opened this issue Mar 17, 2020 · 0 comments
Open

Add an option to control hdf5 storage chunk size #9

lentendu opened this issue Mar 17, 2020 · 0 comments
Assignees
Labels
enhancement New feature or request

Comments

@lentendu
Copy link
Owner

For example -c chunk_size, default value: 1e5

A lower value would increase parallelisation with lower memory request for the edge step (currently 12G for 1 thread).

Need to adapt slurm memory request to this chunk size for the edge step.

@lentendu lentendu added the enhancement New feature or request label Mar 17, 2020
@lentendu lentendu self-assigned this Mar 17, 2020
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
enhancement New feature or request
Projects
None yet
Development

No branches or pull requests

1 participant