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Commits on Dec 1, 2022

• Update DESCRIPTION

  luamnr

  authoredDec 1, 2022
  e99a9f9

Commits on Oct 23, 2022

• bump version to 1.3.2

  yiluheihei

  committedOct 23, 2022
  d9183ec

• for the new version of ANCOMBC

  yiluheihei

  committedOct 23, 2022
  e393cc3

Commits on Jul 3, 2022

• update citation

  yiluheihei

  committedJul 3, 2022
  9255f9a

Commits on Jun 15, 2022

• update bioc github action

  yiluheihei

  committedJun 15, 2022
  8bc937c

• incorporate the new verson of ANCOMBC (1.6.1)

  yiluheihei

  committedJun 15, 2022
  54c2933

Commits on Jun 7, 2022

• fix error if lefse_out is null

  yiluheihei

  committedJun 7, 2022
  008b080

Commits on Jun 1, 2022

• use the default citation

  yiluheihei

  committedJun 1, 2022
  b2e0532

• update README

  yiluheihei

  committedJun 1, 2022
  c6a65cb

• fix ci error: deploy using pkgdown

  yiluheihei

  committedJun 1, 2022
  3d74c2b

Commits on May 31, 2022

• fix error on subgroup in lefse, close yiluheihei#62, close # 55

  yiluheihei

  committedMay 31, 2022
  02bbf87

Commits on May 30, 2022

• use rstudio project

  yiluheihei

  committedMay 30, 2022
  ef1cc7e

Commits on May 26, 2022

• bump version to 1.3.1 and update NEWS

  yiluheihei

  committedMay 26, 2022
  c7dab73

• Merge remote-tracking branch 'upstream/master'

  yiluheihei

  committedMay 26, 2022
  536a78e

Commits on May 19, 2022

• deseq2: round non-integers to the nearest integer

  yiluheihei

  committedMay 19, 2022
  9a2cbff

• set method to the default method of edger/deseq2 if no norm factor pre-esist

  yiluheihei

  committedMay 19, 2022
  77c9a93

• fix: shuffle target vars in sample data of ps

  yiluheihei

  committedMay 19, 2022
  313c5c1

• correct var to

  yiluheihei

  committedMay 19, 2022
  684511d

• new feature: differential analysis methods comparison

  yiluheihei

  committedMay 19, 2022
  4f8c9b5

• ancob support confounding variables

  yiluheihei

  committedMay 19, 2022
  76886e1

• ancombc support confounding variables

  yiluheihei

  committedMay 19, 2022
  db24300

• edger, metagenomeseq, voom support confounders

  yiluheihei

  committedMay 19, 2022
  8119825

• deseq2 support confounders

  yiluheihei

  committedMay 19, 2022
  52c0856

• confounder analysis

  yiluheihei

  committedMay 19, 2022
  d5c4f86

Commits on Apr 26, 2022

• bump x.y.z version to odd y following creation of RELEASE_3_15 branch

  nturaga

  committedApr 26, 2022
  acf7e38

• bump x.y.z version to even y prior to creation of RELEASE_3_15 branch

  nturaga

  committedApr 26, 2022
  ade49e0

Commits on Mar 7, 2022

• update README

  yiluheihei

  committedMar 7, 2022
  d82163d

• update README

  yiluheihei

  committedMar 7, 2022
  9ae4cff

• fix test error: use 3rd version of testthat

  yiluheihei

  committedMar 7, 2022
  354b6a7

Commits on Dec 2, 2021

• improve style of last commit, and add it to NEWS

  yiluheihei

  committedDec 2, 2021
  3ef7c50

• Merge pull request yiluheihei#52 from yanhui09/master

  yiluheihei

  authoredDec 2, 2021
  74846db

Commits on Dec 1, 2021

• Merge branch 'yiluheihei:master' into master

  yanhui09

  authoredDec 1, 2021
  9360035

• leave hues open

  yanhui09

  committedDec 1, 2021
  aa6245f

• update NEWS

  yiluheihei

  committedDec 1, 2021
  7e624fd

• all DA functions support picrust2 output

  yiluheihei

  committedDec 1, 2021
  b1a092a

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