Evaluating cluster analysis methods. The case study of Palaeolithic distribution in Galician territory (NW Iberian Peninsula): source code and data
This repository contains data and code to enable reproducibility of the paper "Evaluating cluster analysis methods. The case study of Palaeolithic distribution in Galician territory (NW Iberian Peninsula)"
/csv/*.csv ... contains CSV files with the data of the sites and the random points
/output/ ... folder with the output files in PDF format
/shp/ ... folder with the layers of the sites, the random points and the study area in vector format
/percolation/ ... folder for percolation analysis
/xls/ ... contains XLS files with the data of the sites and the study area.
Diaz_and_Fabregas_21.Rmd ... Rmarkdown file to reproduce the analysis.
Diaz_and_Fabregas_21.html ... html file to reproduce the analysis.
cluster - Cluster Analysis.
dbscan - Various density-based algorithms methods.
factoextra - Extract and visualize the results of Multivariate Data Analyses
fpc - Various methods for clustering and cluster validation.
ggplot2 - Package for creating graphics.
GISTools - Mapping and spatial data manipulation tools.
gridExtra - User-level functions to work with "grid" graphics.
igraph - Package for generating graphs and network analysis.
maptools - Set of tools for manipulating geographic data.
percopackage - Package for calculating percolation analysis.
plyr - Set of tools that solves problems relates with applying or combining data.
rgdal - Provides bindings to the “GDAL” and “PROJ” library.
rgeos - Package for topology operations on geometries.
sp - Classes and methods for spatial data.
spatstat - Toolbox for analysing Spatial Point Patterns.
tidyverse - Data representations and API design.
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