Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

fix(table-explorer): opening table with over 17 mln records gives _agg timeout error #4270

Open
dtroelofsprins opened this issue Sep 26, 2024 · 0 comments
Labels
bug Something isn't working

Comments

@dtroelofsprins
Copy link
Contributor

dtroelofsprins commented Sep 26, 2024

What version of EMX2 are you using (see footer)
v11.8.0

Describe the bug
Tables with large amounts of data like for example the Samples table on https://palga-emx2.molgenis.net cannot be opened using the table explorer. The following error message is shown:
Exception while fetching data (/Samples_agg) : SQL [select to_jsonb(item) from (select (select to_jsonb(item) from (select count(*) as "count" from (select * from "PODB"."Samples" as "gql_Samples_filter") as "gql_Samples") as "item") as "Samples_agg") as "item"]; ERROR: canceling statement due to user request

To Reproduce
Steps to reproduce the behavior:

  1. Go to 'https://palga-emx2.molgenis.net'
  2. Login (pwd can be found in the Vault)
  3. Click on 'PODB'
  4. Open Samples table
  5. See error

Expected behaviour
Opening the table using the table explorer should work fine in case of large amounts of data. Also the aggregates function should work.

Additional context
In the end over 54 mln will be uploaded in this table, that should also work

@dtroelofsprins dtroelofsprins added the bug Something isn't working label Sep 26, 2024
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
bug Something isn't working
Projects
None yet
Development

No branches or pull requests

1 participant