15.12.1

• Added a Python script that calculates the coverage per gene.
• Created script to replace meta-data lines in FastA files and one the re-create reference genomes from public sources.

15.11.1

NIPTeR pipeline scripts

15.10.4

• make_compute_bed_file script is now producing a chrY female dummy file
• killjobs script
• runtimes script
• added script for checking which project the job belongs to

15.10.3

Added

• CreateFinalReports script

updated

• CreateIlluminaSampleSheet: It can now work with Bcl2FastQ v2
• MakeFinishedAndEnvFiles : added permissions

15.10.2

Removed unnecessary intersect in varSim tool

15.10.1

added varsim vcf compare

15.08.1

• Added ProcessReadCounts.jar for RNA pipeline

v15.07.2

made small changes in the structure (moved 2 R scripts from inside a directory to the root)
added make_compute_bedfiles script for calculon

First ngs-utils release

Merge pull request #35 from RoanKanninga/master

fix NIPT merge