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Postprocessing #73

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merged 14 commits into from
Jul 29, 2021
Merged

Postprocessing #73

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89b50e2
equilibria cleanup
jordidj Jul 8, 2021
3225295
in-code postprocessing init (no pylbo support yet)
jordidj Jun 18, 2021
6b18fca
postprocessing init fix
jordidj Jun 21, 2021
56d68a0
pylbo reading postprocessed quantities from legolas
jordidj Jun 22, 2021
e6bc7d4
write_postprocessed added to automation
jordidj Jun 22, 2021
7877ae3
older datfile compatibility fix
jordidj Jun 22, 2021
9bb55ae
old datfile multirun compatibility
jordidj Jun 22, 2021
bec9a79
postprocessing parallel/perpendicular to B0 (B01 = 0)
jordidj Jun 24, 2021
a41802d
bugfix when not postprocessing
jordidj Jul 1, 2021
d0b9e4f
small cleanup
jordidj Jul 12, 2021
4de5dea
incompressible gamma test and pylbo version check
jordidj Jul 12, 2021
98a1b80
extracted baseclass from eigenfunctions/postprocessing + cleanup
n-claes Jul 13, 2021
5317452
fix version issue during logging + flake8 fix
n-claes Jul 13, 2021
7a4eb93
addition of entropy perturbation to mod_postprocessing
jordidj Jul 15, 2021
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old datfile multirun compatibility
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@jordidj
jordidj committed Jul 12, 2021
commit 9bb55aef705a0521741b2da9c4680f67021c5e32
6 changes: 4 additions & 2 deletions post_processing/pylbo/file_handler.py
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Original file line number Diff line number Diff line change
Expand Up @@ -152,8 +152,10 @@ def load_series(datfiles):
pylboLogger.info("eigenfunctions present in all datfiles")

# check presence of post-processed quantities
pp_present = set([ds.header["postprocessed_written"] for ds in series.datasets])
if len(pp_present) > 1:
pp_present = set([ds.header["postprocessed_written"] for ds in series.datasets if (ds.legolas_version >= "1.1.1")])
if len(pp_present) == 0:
pylboLogger.info("no post-processed quantities present")
elif len(pp_present) > 1:
pylboLogger.info("post-processed quantities present in some datfiles, but not all")
else:
if pp_present.pop():
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