From e6f431aff05b96e18bd76fbb9dedf2a0e9f199b4 Mon Sep 17 00:00:00 2001 From: John Huddleston Date: Wed, 7 Dec 2022 10:36:14 -0800 Subject: [PATCH] Add test data and initial test for titers sub --- .../titers/cram/titers-sub-with-tree.t | 12 + tests/functional/titers/data/aa_seq_HA1.fasta | 840 ++++++++++++++++++ tests/functional/titers/data/titers.tsv | 273 ++++++ tests/functional/titers/data/tree.nwk | 1 + 4 files changed, 1126 insertions(+) create mode 100644 tests/functional/titers/cram/titers-sub-with-tree.t create mode 100644 tests/functional/titers/data/aa_seq_HA1.fasta create mode 100644 tests/functional/titers/data/titers.tsv create mode 100644 tests/functional/titers/data/tree.nwk diff --git a/tests/functional/titers/cram/titers-sub-with-tree.t b/tests/functional/titers/cram/titers-sub-with-tree.t new file mode 100644 index 000000000..5b8784b8f --- /dev/null +++ b/tests/functional/titers/cram/titers-sub-with-tree.t @@ -0,0 +1,12 @@ +Setup + + $ pushd "$TESTDIR" > /dev/null + $ export AUGUR="${AUGUR:-../../../../bin/augur}" + +Test titer substitution model with alignment and tree inputs. + + $ ${AUGUR} titers sub \ + > --alignment data/aa_seq_HA1.fasta \ + > --tree data/tree.nwk \ + > --output $TMP/titers-sub.json > /dev/null + $ diff --git a/tests/functional/titers/data/aa_seq_HA1.fasta b/tests/functional/titers/data/aa_seq_HA1.fasta new file mode 100644 index 000000000..901171337 --- /dev/null +++ b/tests/functional/titers/data/aa_seq_HA1.fasta @@ -0,0 +1,840 @@ +>NODE_0000055 +QDLPGNDNSTATLCLGHHAVPNGTLVKTITDDQIEVTNATELVQSSSTGKICNNPHRILD +GIDCTLIDALLGDPHCDVFQNETWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEF +ITEGFTWTGVTQNGGSNACKRGPGSGFFSRLNWLTKSGSTYPVLNVTMPNNDNFDKLYIW +GVHHPSTNQEQTSLYVQASGRVTVSTRRSQQTIIPNIWSRPWVRGLSSRISIYWTIVKPG +DVLVINSNGNLIAPRGYFKMRTGKSSIMRSDAPIDTCISECITPNGSIPNDKPFQNVNKI +TYGACPKYVKQNTLKLATGMRNVPEKQTR +>A/HongKong/1/1968 +QDLPGNDNSTATLCLGHHAVPNGTLVKTITDDQIEVTNATELVQSSSTGKICNNPHRILD +GIDCTLIDALLGDPHCDVFQNETWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEF +ITEGFTWTGVTQNGGSNACKRGPGSGFFSRLNWLTKSGSTYPVLNVTMPNNDNFDKLYIW +GVHHPSTNQEQTSLYVQASGRVTVSTRRSQQTIIPNIWSRPWVRGLSSRISIYWTIVKPG +DVLVINSNGNLIAPRGYFKMRTGKSSIMRSDAPIDTCISECITPNGSIPNDKPFQNVNKI +TYGACPKYVKQNTLKLATGMRNVPEKQTR +>NODE_0000016 +QDLPGNDNSTATLCLGHHAVPNGTLVKTITDDQIEVTNATELVQSSSTGKICNNPHRILD +GINCTLIDALLGDPHCDVFQNETWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEF +ITEGFTWTGVTQNGGSNACKRGPGSGFFSRLNWLTKSGSTYPVLNVTMPNNDNFDKLYIW +GVHHPSTNQEQTSLYVQASGRVTVSTRRSQQTIIPNIGSRPWVRGLSSRISIYWTIVKPG +DVLVINSNGNLIAPRGYFKMRTGKSSIMRSDAPIDTCISECITPNGSIPNDKPFQNVNKI +TYGACPKYVKQNTLKLATGMRNVPEKQTR +>A/Bilthoven/16190/1968 +QDLPGNDNSTATLCLGHHAVPNGTLVKTITDDQIEVTNATELVQSSSTGKICNNPHRILD +GINCTLIDALLGDPHCDVFQDETWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEF +ITEGFTWTGVTQNGGSNACKRGPGSGFFSRLNWLTKSGSTYPVLNVTMPNNDNFDKLYIW +GVHHPSTNQEQTSLYVQASGRVTVSTRRSQQTIIPNIGSRPWVRGLSSRISIYWTIVKPG +DVLVINSNGNLIAPRGYFKMRTGKSSIMRSDAPIDTCISECITPNGSIPNDKPFQNVNKI +TYGACPKYVKQNTLKLATGMRNVPEKQTR +>NODE_0000015 +QDLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGKICNNPHRILD +GINCTLIDALLGDPHCDVFQNETWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEF +ITEGFTWTGVTQNGGSNACKRGPGSGFFSRLNWLTKSGSTYPVLNVTMPNNDNFDKLYIW +GVHHPSTNQEQTSLYVQASGRVTVSTRRSQQTIIPNIGSRPWVRGLSSRISIYWTIVKPG +DVLVINSNGNLIAPRGYFKMRTGKSSIMRSDAPIDTCISECITPNGSIPNDKPFQNVNKI +TYGACPKYVKQNTLKLATGMRNVPEKQTR +>A/Bilthoven/93/1970 +QDLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGKICNNPHRILD +GVNCTLIDALLGDPHCDVFQNETWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEF +ITEGFTWTGVTQNGGSNACKRGPGSGFFSRLNWLTKSGSTYPVLNVTMPNNDNFDKLYIW +GVHHPSTNQEQTSLYVQASGRVTVSTRRSQQTIIPNIGSRPWVRGQSSRISIYWTIVKPG +DVLVINSNGNLIAPRGYFKMRTGKSSIMRSDAPIDTCISECITPNGSIPNDKPFQNVNKI +TYGACPKYVKQNTLKLATGMRNVPEKQTR +>NODE_0000014 +QDLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGKICNNPHRILD +GIDCTLIDALLGDPHCDGFQNETWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEF +INEGFTWTGVTQNGGSNACKRGPDSGFFSRLNWLYKSGSTYPVLNVTMPNNDNFDKLYIW +GVHHPSTNQEQTSLYVQASGRVTVSTKRSQQTIIPNIGSRPWVRGLSSRISIYWTIVKPG +DILVINSNGNLIAPRGYFKMRTGKSSIMRSDAPIGTCISECITPNGSIPNDKPFQNVNKI +TYGACPKYVKQNTLKLATGMRNVPEKQTR +>A/England/42/1972 +QDLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGKICNNPHRILD +GIDCTLIDALLGDPHCDGFQNETWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEF +INEGFTWTGVTQNGGSNACKRGPDSGFFSRLNWLYKSGSTYPVLNVTMPNNDNFDKLYIW +GVHHPSTNQEQTSLYVQASGRVTVSTKGSQQTIIPNIGSRPWVRGLSSRISIYWTIVKPG +DILVINSNGNLIAPRGYFKMRTGKSSIMRSDAPIGTCISECITPNGSIPNDKPFQNVNKI +TYGACPKYVKQNTLKLATGMRNVPEKQTR +>NODE_0000013 +QDLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGKICNNPHRILD +GIDCTLIDALLGDPHCDGFQNETWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEF +INEGFTWTGVTQNGGSNACKRGPDSGFFSRLNWLYKSGSTYPVLNVTMPNNDNFDKLYIW +GVHHPSTDQEQTSLYVQASGRVTVSTKRSQQTIIPNIGSRPWVRGLSSRISIYWTIVKPG +DILVINSNGNLIAPRGYFKMRTGKSSIMRSDAPIGTCISECITPNGSIPNDKPFQNVNKI +TYGACPKYVKQNTLKLATGMRNVPEKQTR +>A/Bilthoven/5146/1974 +QNFPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGKICNNPHRILD +GIDCTLIDALLGDPHCDGFQNETWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEF +INEGFTWTGVTQNGGSNACKRGPDIGFFSRLNWLYKSGNTYPVLNVSMPNNDNFDKLYIW +GVHHPSTDQEQTSLYVQASGRVTVSTKRSQQTIIPNIGSRPWVRGLSSRISIYWTIVKPG +DILVINSNGNLIAPRGYFKMRTGKSSIMRSDASIGTCISECITPNGSIPNDKPFQNVNKI +TYGACPKYVKQNTLKLATGMRNVPEKQTR +>NODE_0000011 +QDLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGKICNNPHRILD +GINCTLIDALLGDPHCDGFQNEKWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEF +INEGFNWTGVTQNGGSNACKRGPDSGFFSRLNWLYKSGSTYPVLNVTMPNNDNFDKLYIW +GVHHPSTDKEQTNLYVQASGRVTVSTKRSQQTIIPNVGSRPWVRGLSSRISIYWTIVKPG +DILVINSNGNLIAPRGYFKMRTGKSSIMRSDAPIGTCSSECITPNGSIPNDKPFQNVNKI +TYGACPKYVKQNTLKLATGMRNVPEKQTR +>NODE_0000012 +QDLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGKICNNPHRILD +GINCTLIDALLGDPHCDGFQNEKWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEF +INEGFNWTGVTQNGGSSACKRGPDSGFFSRLNWLYKSGSTYPVQNVTMPNNDNSDKLYIW +GVHHPSTDKEQTNLYVQASGKVTVSTKRSQQTIIPNVGSRPWVRGLSSRISIYWTIVKPG +DILVINSNGNLIAPRGYFKMRTGKSSIMRSDAPIGTCSSECITPNGSIPNDKPFQNVNKI +TYGACPKYVKQNTLKLATGMRNVPEKQTR +>NODE_0000010 +QDLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICNNPHRILD +GINCTLIDALLGDPHCDGFQNEKWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEF +INEGFNWTGVTQNGGSYACKRGPDNGFFSRLNWLYKSESTYPVLNVTMPNNDNFDKLYIW +GVHHPSTDKEQTNLYVQASGRVTVSTKRSQQTIIPNVGSRPWVRGLSSRISIYWTIVKPG +DILVINSNGNLIAPRGYFKIRTGKSSIMRSDAPIGTCSSECITPNGSIPNDKPFQNVNKI +TYGACPKYVKQNTLKLATGMRNVPEKQTR +>A/Bilthoven/5168/1976 +QDLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGKICDNPHRILD +GINCTLIDALLGDPHCDGFQNEKWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEF +INEGFNWTGVTQNGGSSACKRGPDNGFFSRLNWLYKSGSTYPVQNVTMPNNDNSDKLYIW +GVHHPSTDKEQTDLYVQASGKVTVSTKRSQQTVIPNVGSRPWVRGLSSRVSIYWTIVKPG +DILIINSNGNLIAPRGYFKMRTGKSSIMRSDAPIGTCSSECITPNGSIPNDKPFQNVNKI +TYGACPKYVKQNTLKLATGMRNVPEKQTR +>A/Victoria/3/1975 +QDLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGKICNNPHRILD +GINCTLIDALLGDPHCDGFQNEKWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEF +INEGFNWTGVTQNGGSSACKRGPDSGFFSRLNWLYKSGSTYPVQNVTMPNNDNSDKLYIW +GVHHPSTDKEQTNLYVQASGKVTVSTKRSQQTIIPNVGSRPWVRGLSSRISIYWTIVKPG +DILVINSNGNLIAPRGYFKMRTGKSSIMRSDAPIGTCSSECITPNGSIPNDKPFQNVNKI +TYGACPKYVKQNTLKLATGMRNVPEKQTR +>A/Bilthoven/2271/1976 +QDLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICNNPHRILD +GINCTLIDALLGDPHCDGFQNKKWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEF +INEGFNWTGVTQNGGSYACKRGPDNGFFSRLNWLYKSESTYPVLNVTMPNNDNFDKLYIW +GVHHPSTDKEQTNLYVQASGRVTVSTKRSQQTIIPNVGSRPWVRGLSSRISIYWTIVKPG +DILVINSNGNLIAPRGYFKIRNGKSSIMRSDAPIGTCSSECITPNGSIPNDKPFQNVNKI +TYGACPKYVKQNTLKLATGMRNVPEKQTR +>NODE_0000008 +QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD +GKNCTLIDALLGDPHCDGFQNEKWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEF +INEGFNWTGVTQSGGSYACKRGSVNSFFSRLNWLYESEYKYPALNVTMPNNGKFDKLYIW +GVHHPSTDKEQTNLYVRASGRVTVSTKRSQQTVIPNIGSRPWVRGLSSRISIYWTIVKPG +DILLINSTGNLIAPRGYFKIRTGKSSIMRSDAPIGTCSSECITPNGSIPNDKPFQNVNKI +TYGACPRYVKQNTLKLATGMRNVPEKQTR +>NODE_0000009 +QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD +GKNCTLIDALLGDPHCDGFQNEKWDLFIERSKAFSNCYPYDVPDYASLRSLVASSGTLEF +INEGFNWTGVTQSGGSYACKRGSVNSFFSRLNWLYESEYKYPALNVTMPNNGKFDKLYIW +GVHHPSTEKEQTNLYVRASGRVTVSTKRSQQTVIPNIGSRPWVRGLSSRISIYWTIVKPG +DILLINSTGNLIAPRGYFKIRTGKSSIMRSDAPIGTCSSECITPNGSIPNDKPFQNVNKI +TYGACPRYVKQNTLKLATGMRNVPEKQTR +>NODE_0000007 +QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD +GKNCTLIDALLGDPHCDGFQNEKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF +INEDFNWTGVTQSGGSYACKRGSVNSFFSRLNWLHESEYKYPALNVTMPNNGKFDKLYIW +GVHHPSTDREQTNLYVRASGRVTVSTKRSQQTVIPNIGSRPWVRGLSSRISIYWTIVKPG +DILLINSTGNLIAPRGYFKIRTGKSSIMRSDAPIGTCSSECITPNGSIPNDKPFQNVNKI +TYGACPRYVKQNTLKLATGMRNVPEKQTR +>A/ChristChurch/2/1988 +QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD +GKNCTLIDALLGDPHCDGFQNEKWDLFIERSKAFSNCYPYDVPDYASLRSLVASSGTLEF +INEGFNWTGVTQNGGSYACKRGSVNSFFSRLNWLYESEYKYPALNVTMPNNGKFDKLYIW +GVHHPITEKEQTNLYVRASGRVTVSTKRSQQTRIPNIGSRPWVRGLSSRISIYWTIVKPG +DILLINSTGNLIAPRGYFKIRTGKSSIMRSDAPIGTCSSECITPNGSIPNDKPFQNVNKI +TYGACPRYGKQNTLKLATGMRNVPEKQTR +>A/Leningrad/360/1986 +QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD +GKNCTLIDALLGDPHCDGFQNEKWDLFIERSKAFSNCYPYDVPDYASLRSLVASSGTLEF +INEGFNWTGVTQSGGSYTCKRGSVNSFFSRLNWLYESEYKYPALNVTMPNNGKFDKLYIW +GVHHPSTEKEQTNLYVRASGRVTVSTKRSQQTVIPNIGSSPWVRGLSSRISIYWTIVKPG +DILLINSTGNLIAPRGYFKIRTGKSSIMRSDAPIGTCSSECITPNGSIPNDKPFQNVNKI +TYGACPRYVKQNTLKLATGMRNVPEKQTR +>A/Victoria/7/1987 +QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD +GKNCTLIDALLGDPHCDGFQNEKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF +INEDFNWTGVTQSGGSYACKRGSVNSFFSRLNWLHESEYKYPALNVTMPNNGKFDKLYIW +GVHHPSTDREQTNLYVRASGRVTVSTKRSQQTVIPNIGSRPWVRGLSSRISIYWTIVKPG +DILLINSTGNLIAPRGYFKIRTGKSSIMRSDAPIGTCSSECITPNGSIPNDKPFQNVNKI +TYGACPRYVKQNTLKLATGMRNVPEKQTR +>NODE_0000006 +QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD +GKNCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF +INEDFNWTGVAQSGGSYACKRGSVNSFFSRLNWLHESEYKYPALNVTMPNNGKFDKLYIW +GVHHPSTDREQTNLYVRASGRVTVSTKRSQQTVIPNIGSRPWVRGLSSRISIYWTIVKPG +DILLINSTGNLIAPRGYFKIRTGKSSIMRSDAPIGTCSSECITPNGSIPNDKPFQNVNRI +TYGACPRYVKQNTLKLATGMRNVPEKQTR +>A/Seoul/1/1990 +QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD +GKNCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF +INEDFNWTGVAQSGGSYACKRGSVNSFFSRLNWLHESEYKYPALNVTMPNNGKFDKLYIW +GVHHPSTDREQTNLYVRASGRVTVSTKRSQQTVIPNIGSRPWVRGLSSRISIYWTIVKPG +DILLINSTGNLIAPRGYFKIRTGKSSIMRSDAPIGTCSSECITPNGSIPNDKPFQNVNRI +TYGACPRYVKQNTLKLATGMRNVPEKQTR +>NODE_0000004 +QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD +GKNCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF +INEDFNWTGVAQSGGSYACKRGSVNSFFSRLNWLHESEYKYPALNVTMPNNGKFDKLYIW +GVHHPSTDREQTSLYVRASGRVTVSTKRSQQTVIPNIGSRPWVRGLSSRISIYWTIVKPG +DILLINSTGNLIAPRGYFKIRTGKSSIMRSDAPIGTCSSECITPNGSIPNDKPFQNVNRI +TYGACPRYVKQNTLKLATGMRNVPEKQTR +>NODE_0000005 +QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD +GKNCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF +TNEDFNWTGVAQSGESYACKRGSVKSFFSRLNWLHESDYKYPALNVTMPNNGKFDKLYIW +GVHHPSTDREQTSLYVRASGRVTVSTKRSQQTVIPNIGSRPWVRGLSSRISIYWTIVKPG +DILLINSTGNLIAPRGYFKIRTGKSSIMRSDAPIGTCSSECITPNGSIPNDKPFQNVNRI +TYGACPRYVKQNTLKLATGMRNVPEKQTR +>NODE_0000003 +QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD +GKNCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF +INEDFNWTGVAQDGGSYACKRGSVNSFFSRLNWLHKLEYKYPALNVTMPNNGKFDKLYIW +GVHHPSTDSDQTSLYVRASGRVTVSTKRSQQTVIPNIGSRPWVRGLSSRISIYWTIVKPG +DILLINSTGNLIAPRGYFKIRNGKSSIMRSDAPIGNCSSECITPNGSIPNDKPFQNVNRI +TYGACPRYVKQNTLKLATGMRNVPEKQTR +>A/SouthAustralia/23/1992 +QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD +GKNCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF +TNEDFNWTGVAQSGESYACKRGSVKSFFSRLNWLHESDYKYPALNVTMPNNGKFDKLYIW +GVHHPSTDREQTSLYVRASGRVTVSTKRSQQTVIPNIGSRPWVRGLSSRISIYWTIVKPG +DILLINSTGNLIAPRGYFKIRTGKSSIMRSDAPIGTCSSECITPNGSIPNDKPFQNVNRI +TYGACPRYVKQNTLKLATGMRNVPEKQTR +>A/SouthAustralia/27/1992 +QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD +GKNCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF +TNEDFNWTGVAQSGESYACKRGSVKSFFSRLNWLHESDYKYPALNVTMPNNGKFDKLYIW +GVHHPSTDREQTSLYVRASGRVTVSTKRSQQTVIPNIGSRPWVRGLSSRISIYWTIVKPG +DILLINSTGNLIAPRGYFKIRTGKSSIMRSDAPIGTCSSECITPNGSIPNDKPFQNVNRI +TYGACPRYVKQNTLKLATGMRNVPEKQTR +>NODE_0000002 +QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD +GKNCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF +INEDFNWTGVAQDGGSYACKRGSVNSFFSRLNWLHKLEYKYPALNVTMPNNGKFDKLYIW +GVHHPSTDSDQTSLYVRASGRVTVSTKRSQQTVTPNIGSRPWVRGLSSRISIYWTIVKPG +DILLINSTGNLIAPRGYFKIRNGKSSIMRSDAPIGNCSSECITPNGSIPNDKPFQNVNRI +TYGACPRYVKQNTLKLATGMRNVPEKQTR +>NODE_0000017 +QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD +GKNCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF +INEDFNWTGVAQDGGSYACKRGSVNSFFSRLNWLHKLEYKYPALNVTMPNNGKFDKLYIW +GVHHPSTDSDQTSLYVRASGRVTVSTKRSQQTVIPNIGSRPWVRGLSSRISIYWTIVKPG +DILLINSTGNLIAPRGYFKIRNGKSSIMRSDAPIGNCSSECITPNGSIPNDKPFQNVNRI +TYGACPRYVKQNTLKLATGMRNVPEKQTR +>A/Oslo/2352/1993 +QKIPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD +GKNCTLIDALLGDPNCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF +TNEDFNWTGVAQDGGSYACKRGSVNSFFSRLNWLHKLEYKYPALNVTMPNNGKFDKLYIW +GVHHPSTDSDQTSLYVRASGRVTVSTKRSQQTVTPNIGSRPWVRGLSSRISIYWTIVKPG +DILLINSTGNLIAPRGYFKIRNGKSSIMRSDAPIGTCSSECITPNGSIPNDKPFQNVNRI +TYGACPRYVKQNTLKLATGMRNVPEKQTR +>NODE_0000000 +QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD +GKNCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF +INEDFNWTGVAQDGGSYACKRGSVNSFFSRLNWLHKLEYKYPALNVTMPNNGKFDKLYIW +GVHHPSTDSDQTSLYVRASGRVTVSTKRSQQTVTPNIGSRPWVRGLSSRISIYWTIVKPG +DILLINSTGNLIAPRGYFKIRNGKSSIMRSDAPIGNCSSECITPNGSIPNDKPFQNVNRI +TYGACPRYVKQNTLKLATGMRNVPEKQTR +>A/Madrid/G130/1993 +QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD +GKNCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF +INEDFNWTGVAQDGGSYACKRGSVNSFFSRLNWLHKLEYKYPALNVTMPNNGKFDKLYIW +GVHHPSTDSDQTSLYVRASGRVTVSTKRSQQTVTPNIGSRPWVRGLSSRISIYWTIVKPG +DILLINSTGNLIAPRGYFKIRNGKSSIMRSDVPIGNCSSECITPNGSIPNDKPFQNVNRI +TYGACPRYVKQNTLKLATGMRNVPEKQTR +>NODE_0000001 +QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD +GKNCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF +INEDFNWTGVAQDGGSYACKRGSVNSFFSRLNWLHKLEYKYPALNVTMPNNGKFDKLYIW +GVHHPSTDSDQTSLYVRASGRVTVSTKRSQQTVTPNIGSRPWVRGQSSRISIYWTIVKPG +DILLINSTGNLIAPRGYFKIRNGKSSIMRSDAPIGNCSSECITPNGSIPNDKPFQNVNRI +TYGACPRYVKQNTLKLATGMRNVPEKQTR +>A/Shiga/6/1993 +QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD +GKNCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF +INEDFNWTGVAQDGGSYACKRGSVNSFFSRLNWLHKLEYKYPALNVTMPNNGKFDKLYIW +GVHHPSTDSDQTSLYVRASGRVTVSTKRSQQTVTPNIGSRPWVRGQSSRISIYWTIVKPG +DILLINSTGNLIAPRGYFKIRNGKSSIMRSDAPIGNCSSECITPNGSIPNDKPFQNVNRI +TYGACPRYVKQNTLKLATGMRNVPEKQTR +>A/Yamagata/62/1993 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+DILLINSTGNLIAPRGYFKIRNGKSSIMRSDAPIGNCSSECITPNGSIPNDKPFQNVNRI +TYGACPRYVKQNTLKLATGMRNVPEKQTR +>NODE_0000019 +QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD +GKNCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF +INEDFNWTGVAQDGKSYACKRGSVNSFFSRLNWLHKLEYKYPALNVTMPNNGKFDKLYIW +GVHHPSTDSDQTSLYVRASGRVTVSTKRSQQTVIPNIGSRPWVRGQSSRISIYWTIVKPG +DILLINSTGNLIAPRGYFKIRNGKSSIMRSDAPIGNCSSECITPNGSIPNDKPFQNVNRI +TYGACPRYVKQNTLKLATGMRNVPEKQTR +>NODE_0000022 +QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD +GKNCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF +TNEGFNWTGVAQDGKSYACKRGSVNSFFSRLNWLHKLEYKYPALNVTMPNNDKFDKLYIW +GVHHPSTDSDQTSLYVQASGRVTVSTKRSQQTVIPNIGSRPWVRGISSRISIYWTIVKPG +DILLINSTGNLIAPRGYFKIRNGKSSIMRSDAPIGNCNSECITPNGSIPNDKPFQNVNRI +TYGACPRYVKQNTLKLATGMRNVPEKQTR +>A/Netherlands/371/1993 +QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD +GKNCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF +INEDFNWTGVAQDGKSYACKRGSVNSFFSRLNWLHKLEYKYPALNVTMPNNGKFDKLYIW +GVHHPSTDSDQTSLYVRASGRVTVATKRSQQTVIPNIGFRPWVRGQSSGISIYWTIVKPG +DILLINSTGNLIAPRGYFKIRNGKSSIMRSDAPIGNCSSECITPNGSIPNDKPFQNVNRI +TYGACPRYVKQNTLKLATGMRNVPEKQTR +>NODE_0000020 +QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSPTGRICDSPHRILD +GKNCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF +INENFNWTGVAQDGKSYACKRGSVNSFFSRLNWLHKLEYKYPALNVTMPNNGKFDKLYIW +GVHHPSTDSDQTSLYVRASGRVTVSTKRSQQTVIPDIGYRPWVRGQSSRISIYWTIVKPG +DILLINSTGNLIAPRGYFKIRNGKSSIMRSDAPIGNCSSECITPNGSIPNDKPFQNVNRI +TYGACPRYVKQNTLKLATGMRNVPEKQTR +>A/Johannesburg/47/1994 +QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQNSPTGRICDSPHRILD +GKNCTLIDALLGDPHCDGLQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF +INENFNWTGVAQDGKSYACKRGSVNSFFSRLNWLHKLEYKYPALNVTMPNNGKFDKLYIW +GVHHPSTDSDQTSLYVRASGRVTVSTKRSQQTVIPDIGYRPWVRGQSSRISIYWTIVKPG +DILLINSTGNLIAPRGYFKLRNGKSSIMRSDAPIGNCSSECITPNGSIPNDKPFQNVNRI +TYGPCPRYVKQNTLKLATGMRNVPEKQTR +>NODE_0000021 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+TNEGFNWTGVAQDGTSYACKRGSVKSFFSRLNWLHKLEYKYPALNVTMPNNDKFDKLYIW +GVHHPSTDSDQTSLYVQASGRVTVSTKRSQQTVIPNIGSRPWVRGISSRISIYWTIVKPG +DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGNCNSECITPNGSIPNDKPFQNVNRI +TYGACPRYVKQNTLKLATGMRNVPEKQTR +>A/Geneva/AI9509/1995 +QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD +GKNCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF +TKEGFNWTGVAQDGKSYACKRGSVNSFFSRLNWLHKLEYKYPALNVTMPNNDKFDKLYIW +GVHHPSTDSDQTSLYVQASGRVTVSTKRSQQTVIPNIGSRPWVRGISSRISIYWTIVKPG +DILLINSTGNLIAPRGYFKIRNGKSSIMRSDAPIGNCNSECITPNGSIPNDKPFQNVNRI +TYGACPRYVKQNTLKLATGMRNVPEKQTR +>A/HongKong/38/1995 +QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD +GKNCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF +TKEGFNWTGVAQDGKSYACKRGSVNSFFSRLNWLHKLEYKYPALNVTMPNNDKFDKLYIW +GVHHPSTDSDQTSLYVQASGRVTVSTKRSQQTVIPNIGSRPWVRGISSRISIYWTIVKPG +DILLINSTGNLIAPRGYFKIRNGKSSIMRSDAPIGNCKSECITPNGSIPNDKPFQNVNRI +TYGACPRYVKQNTLKLATGMRNVPEKQTR +>A/Wuhan/359/1995 +QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD +GKNCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF +TNEGFNWTGVAQDGTSYACKRGSVKSFFSRLNWLHKLEYKYPALNVTMPNNDKFDKLYIW +GVHHPSTDSDQTSIYVQASGRVTVSTKRSQQTVIPNIGSRPWVRGISSRISIYWTIVKPG +DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGNCNSECITPNGSIPNDKPFQNVNRI +TYGACPRYVKQNTLKLATGMRNVPEKQTR +>NODE_0000025 +QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD +GKNCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF +TNEGFNWTGVAQDGTSYACKRGSVKSFFSRLNWLHKLEYKYPALNVTMPNNDKFDKLYIW +GVHHPSTDSDQTSLYVQASGRVTVSTKRSQQTVIPNIGSRPWVRGVSSRISIYWTIVKPG +DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGNCNSECITPNGSIPNDKPFQNVNRI +TYGACPRYVKQNTLKLATGMRNVPEKQTR +>NODE_0000026 +QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD +GKNCTLIDALLGDPHCDGFQNKEWDLFVERSTAYSNCYPYDVPDYASLRSLVASSGTLEF +TNEGFNWTGVAQDGTSYACKRGSVKSFFSRLNWLHKLEYKYPALNVTMPNNDKFDKLYIW +GVHHPSTDSDQTSLYVQASGRVTVSTKRSQQTVIPNIGSRPWVRGVSSRISIYWTIVKPG +DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIDNCNSECITPNGSIPNDKPFQNVNRI +TYGACPRYVKQNTLKLATGMRNVPEKQTR +>NODE_0000027 +QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD +GENCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF +NNESFNWTGVAQNGTSYACKRRSIKSFFSRLNWLHQLKYKYPALNVTMPNNDKFDKLYIW +GVHHPSTDSDQTSLYAQASGRVTVSTKRSQQTVIPNIGSRPWVRGVSSRISIYWTIVKPG +DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI +TYGACPRYVKQNTLKLATGMRNVPEKQTR +>A/HongKong/280/1997 +QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD +GKNCTLIDALLGDPHCDGFQNKEWDLFVERSTAYSNCYPYDVPDYASLRSLVASSGTLEF +TNEGFNWTGVAQDGTSYACKRRSVKSFFSRLNWLHKLEYKYPALNVTMPNNDKFDKLYIW +GVHHPSTDSDQTSLYVHASGRVTVSTKRSQQTVIPNIGSRPWVRGVSSRISIYWTIVKPG +DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIDNCNSECITPNGSIPNDKPFQNVNRI +TYGACPRYVKQNTLKLATGMRNVPEKQTR +>A/Oslo/244/1997 +QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD +GKNCTLIDALLGDPHCDGFKNKEWDLFVERSTAYSNCYPYDVPDYASLRSLVASSGTLEF +TNEGFNWTGVAQDGTSYACKRGSVKSFFSRLNWLHKLEYKYPALNVTMPNNDKFDKLYIW +GVHHPSTDSDQTSLYVQASGRVTVSTKRSQQTVIPNIGSRPWVRGVSSRISIYWTIVKPG +DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIDNCNSECITPNGSIPNDKPFQNVNRI +TYGPCPRYVKQNTLKLATGMRNVPEKQTR +>A/Netherlands/414/1998 +QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHRILD +GENCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVQDYASLRSLVASSGTLEF +NNESFNWTGVAQNGTSYACKRRSIKSFFSRLNWLHQLKYKYPALNVTMPNNDKFDKLYIW +GVHHPSTDSDQTSLYAQASGRVTVSTKRSQQTVIPNIGSRPWVRGVSSRISIYWTIVKPG +DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI +TYGACPRYVKQNNLKLATGMRNVPEKQTR +>NODE_0000028 +QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHQILD +GENCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF +NNESFNWTGVAQNGTSSACKRRSNKSFFSRLNWLHQLKYKYPALNVTMPNNEKFDKLYIW +GVHHPSTDSDQISLYAQASGRVTVSTKRSQQTVIPNIGSRPWVRGVSSRISIYWTIVKPG +DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI +TYGACPRYVKQNTLKLATGMRNVPEKQTR +>A/Philippines/1159050/2002 +QKLPGNDNSTATLCLGHHAVSNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHQILD +GENCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF +NNESFNWTGVAQNGTSSACKRGSNKSFFSRLNWLHQLKDKYPALNVTMPNNEKFDKLYIW +GVLHPSTDSDQISLYAQASGRVTVSTKRSQQTVIPNIGSRPWVRGVSSRISIYWTIVKPG +DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI +TYGACPRYVKQNTLKLATGMRNVPEKQTR +>NODE_0000029 +QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHQILD +GENCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF +NNESFNWTGVAQNGTSSACKRRSNKSFFSRLNWLHQLKYKYPALNVTMPNNEKFDKLYIW +GVHHPGTDSDQISLYAQASGRVTVSTKRSQQTVIPNIGSRPWVRGVSSRISIYWTIVKPG +DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI +TYGACPRYVKQNTLKLATGMRNVPEKQTR +>NODE_0000030 +QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHQILD +GENCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYVSLRSLVASSGTLEF +NNESFNWTGVAQNGTSSACKRRSNKSFFSRLNWLHQLKYKYPALNVTMPNNEKFDKLYIW +GVHHPGTDSDQISLYAQASGRVTVSTKRSQQTVIPNIGSRPWVRGVSSRISIYWTIVKPG +DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI +TYGACPRYVKQNTLKLATGMRNVPEKQTR +>NODE_0000033 +QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGGICDSPHQILD +GENCTLIDALLGDPHCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEF +NNESFNWTGVAQNGTSSACKRRSNKSFFSRLNWLHQLKYKYPALNVTMPNNEKFDKLYIW +GVHHPGTDSDQISLYAQASGRITVSTKRSQQTVIPNIGSRPRVRDVSSRISIYWTIVKPG +DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI +TYGACPRYVKQNTLKLATGMRNVPEKQTR +>A/SouthAustralia/102/2001 +QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHQILD +GENCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYVSLRSLVASSGTLEF +NNESFNWTGVAQNGTSSACKRRSNKSFFSRLNWLHQLKYKYPALNVTMPNNEKFDKLYIW +GVHHPGTDSDQISLYAQASGRVTVSTKRSQQTVIPNIGSRPWVRGVSSRISIYWTIVKPG +DILLINSTGNLIAPRGYFKIRSGKSSIMRSDAPIGKCNSECITPNGSIPNDKPFQNVNRI +TYGACPRYVKQNTLKLATGMRNVPEKQTR +>NODE_0000031 +QKLPGNDNSTATLCLGHHAVPNGTLVKTITNDQIEVTNATELVQSSSTGRICDSPHQILD +GENCTLIDALLGDPHCDGFQNKEWDLFVERSKAYSNCYPYDVPDYVSLRSLVASSGTLEF 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A/Wisconsin/3/2007 A/Wis/3/07_F15/07 nimr-march-2008-table5 640 +A/Wisconsin/3/2007 A/Nepal/921/2006 A/Nepal/921/06_F2/07 nimr-march-2008-table5 5120 +A/Wisconsin/3/2007 A/Wisconsin/3/2007 A/Wis/3/07_F15/07 nimr-march-2008-table5 2560 +A/Uruguay/716/2007 A/Nepal/921/2006 A/Nepal/921/06_F2/07 nimr-march-2008-table5 2560 +A/Uruguay/716/2007 A/Wisconsin/3/2007 A/Wis/3/07_F15/07 nimr-march-2008-table5 640 +A/Uruguay/716/2007 A/Uruguay/716/2007 A/Uru/716/07_F26/08 nimr-sep-2010-table8 1280 +A/Uruguay/716/2007 A/Wisconsin/15/2009 A/Wis/15/09_F24/09 nimr-sep-2010-table8 <40 +A/Uruguay/716/2007 A/RhodeIsland/1/2010 A/RhodeIs/1/10_CDC77/10 nimr-sep-2010-table8 40 +A/Wisconsin/15/2009 A/Uruguay/716/2007 A/Uru/716/07_F26/08 nimr-sep-2010-table8 <40 +A/Wisconsin/15/2009 A/Wisconsin/15/2009 A/Wis/15/09_F24/09 nimr-sep-2010-table8 320 +A/Wisconsin/15/2009 A/RhodeIsland/1/2010 A/RhodeIs/1/10_CDC77/10 nimr-sep-2010-table8 320 +A/RhodeIsland/1/2010 A/Uruguay/716/2007 A/Uru/716/07_F26/08 nimr-sep-2010-table8 40 +A/RhodeIsland/1/2010 A/Wisconsin/15/2009 A/Wis/15/09_F24/09 nimr-sep-2010-table8 80 +A/RhodeIsland/1/2010 A/RhodeIsland/1/2010 A/RhodeIs/1/10_CDC77/10 nimr-sep-2010-table8 640 +A/Wisconsin/15/2009 A/Wisconsin/15/2009 A/Wis/15/09_F24/09 nimr-sep-2011-2011-04-12 320 +A/Wisconsin/15/2009 A/Wisconsin/15/2009 A/Wis/15/09_F24/09 nimr-sep-2011-2011-05-13 160 +A/Wisconsin/15/2009 A/Wisconsin/15/2009 A/Wis/15/09_F24/09 nimr-sep-2011-2011-05-18 320 +A/Wisconsin/15/2009 A/Wisconsin/15/2009 A/Wis/15/09_F24/09 nimr-sep-2011-2011-06-24 160 +A/Wisconsin/15/2009 A/Wisconsin/15/2009 A/Wis/15/09_F24/09 nimr-sep-2011-2011-06-24b 160 diff --git a/tests/functional/titers/data/tree.nwk b/tests/functional/titers/data/tree.nwk new file mode 100644 index 000000000..a11c2c311 --- /dev/null +++ b/tests/functional/titers/data/tree.nwk @@ -0,0 +1 @@ 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