diff --git a/docs/api/developer/augur.curate.rename.rst b/docs/api/developer/augur.curate.rename.rst new file mode 100644 index 000000000..a43d4fec6 --- /dev/null +++ b/docs/api/developer/augur.curate.rename.rst @@ -0,0 +1,7 @@ +augur.curate.rename module +========================== + +.. automodule:: augur.curate.rename + :members: + :undoc-members: + :show-inheritance: diff --git a/docs/api/developer/augur.curate.rst b/docs/api/developer/augur.curate.rst index 529991e6f..ee0c95e6d 100644 --- a/docs/api/developer/augur.curate.rst +++ b/docs/api/developer/augur.curate.rst @@ -20,5 +20,6 @@ Submodules augur.curate.normalize_strings augur.curate.parse_genbank_location augur.curate.passthru + augur.curate.rename augur.curate.titlecase augur.curate.transform_strain_name diff --git a/docs/usage/cli/curate/index.rst b/docs/usage/cli/curate/index.rst index a83bd1ce3..454c23efe 100644 --- a/docs/usage/cli/curate/index.rst +++ b/docs/usage/cli/curate/index.rst @@ -25,4 +25,5 @@ We will continue to add more subcommands as we identify other common data curati abbreviate-authors parse-genbank-location transform-strain-name + rename diff --git a/docs/usage/cli/curate/rename.rst b/docs/usage/cli/curate/rename.rst new file mode 100644 index 000000000..3fa5480f6 --- /dev/null +++ b/docs/usage/cli/curate/rename.rst @@ -0,0 +1,9 @@ +====== +rename +====== + +.. argparse:: + :module: augur + :func: make_parser + :prog: augur + :path: curate rename