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cloc counts blank lines, comment lines, and physical lines of source code in many programming languages.
Good-lookin' diffs. Actually… nah… The best-lookin' diffs. 🎉
a tool for backing up your data using rsync (if you want to get help, use https://lists.sourceforge.net/lists/listinfo/rsnapshot-discuss)
Client for PPP+TLS VPN tunnel services
Simple script to analyse your PostgreSQL database configuration, and give tuning advice
Main repository for munin master / node / plugins
**ack 2 is no longer being maintained. ack 3 is the latest version.**
Automatically exported from code.google.com/p/cdhit
The Ensembl Variant Effect Predictor predicts the functional effects of genomic variants
Plugins for the Ensembl Variant Effect Predictor (VEP)
A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.
Tools for the analysis of structural variation in genomes
A collection of scripts developed to interact with fasta, fastq and sam/bam files.
Seeking information like heteroplasmy, structure variants, etc. on Mitochondrial genome from next generation sequencing
A collection of geektool scripts, moved from nicinabox.com
Toolbox for generic NGS analyses - A framework to quickly build pipelines and to perform large-scale NGS analysis
GARFIELD-NGS: Genomic vARiants FIltering by dEep Learning moDels in NGS
Conversion XSLTs for NCBI Eutilities XML to JSON
ERVcaller is a tool designed to accurately detect and genotype non-reference unfixed endogenous retroviruses (ERVs) and other transposable elements (TEs) in the human genome using next-generation s…
A pipeline to rapidly detect exogenous DNA integration sites using DNA or RNA paired-end sequencing data
VarGenius is a software for variants discovery and annotation. It allows efficient management of folder data and jobs submission into a PBS cluster. All the variants will be inserted into a Postgre…
scripts, tools and example configuration files for VINYL