csvtk join -k -f version \
<(pigz -cd gtdb-taxid-changelog.csv.gz \
| csvtk grep -f change -p DELETE \
| csvtk freq -f version) \
<(pigz -cd gtdb-taxid-changelog.csv.gz \
| csvtk grep -f change -p NEW \
| csvtk freq -f version) \
<(pigz -cd gtdb-taxid-changelog.csv.gz \
| csvtk grep -f change -p MERGE \
| csvtk freq -f version) \
<(pigz -cd gtdb-taxid-changelog.csv.gz \
| csvtk grep -f change -p REUSE_DEL \
| csvtk freq -f version) \
<(pigz -cd gtdb-taxid-changelog.csv.gz \
| csvtk grep -f change -p REUSE_MER \
| csvtk freq -f version) \
| csvtk rename -f -1 -n deleted,newly_added,merged,deleted_reused,merged_reused \
> changes.csv
cat changes.csv \
| csvtk gather -k types -v count -f 2-6 \
> changes.g.csv
./plot.R
stats
Folders and files
Name | Name | Last commit date | ||
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parent directory.. | ||||