Activity-normalized variant effect size estimation from pooled CRISPR screens
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Updated
Jun 25, 2024 - Python
Activity-normalized variant effect size estimation from pooled CRISPR screens
Flexible analysis of high-content CRISPR screening
A Rust reimplementation of the MinCED method for identifying CRISPRs in full or assembled genomes.
Cutting-edge Full-stack AI Platform delivered as a SaaS (Software as a Service). Built on a robust technology stack, integrated with powerful APIs such as OpenAI and Replicate, offers a seamless experience for code generation, conversation simulation, image creation, music composition, and video generation.
Enhance your fundamental molecular biology techniques to yield better outcomes.
A pipeline for the analysis of CRISPR edited data. It allows the evaluation of the quality of gene editing experiments using targeted next generation sequencing (NGS) data (`targeted`) as well as the discovery of important genes from knock-out or activation CRISPR-Cas9 screens using CRISPR pooled DNA (`screening`).
Mosquito Networks Taskforce: Data Analysis
List of software/websites/databases/other stuff for genome engineering
Creates a construct developed by the Niles Lab at MIT, designed to deliver a 3' UTR post-transcriptional regulatory element payload to a specific given gene in Plasmodium falciparum.
FlashFry: The rapid CRISPR target site characterization tool
Gene Drive (CRISPR) population crash simulation.
A Computational Workflow for Designing Libraries of sgRNAs for CRISPR-Mediated Base Editing, and much more
software as a service app build on AI have features such as finding image , codes and much more.
SciGrade is an online web-tool that allows students (or any user with access) to mark and assist in gRNA+Primer generation.
Multi-omics analysis of LFQ proteomics and transcriptomics of an ALMS1 gene knockout cell model after TGF-B pathway stimulation.
SpacePHARER CRISPR Spacer Phage-Host pAiRs findER
An interactive exploration/visualization platform to help you lift the fog from your CRISPR analyses.
Analysis of CRISPR self-targeting spacers
Python library for genome editing, CRISPR gRNA design and prediction
Finding, Optimizing, and Reporting Cas Targets: a fully-integrated and open-source pipeline to design CRISPR mutagenesis experiments.
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