Mondo Disease Ontology
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Updated
Jun 28, 2024 - Jupyter Notebook
Mondo Disease Ontology
LLM-based ontological extraction tools, including SPIRES
source files for OBA (Ontology of Biological Attributes)
Ontology for the description of human clinical features
An ontology of cell types
DEMO example knowledge base created using DRAGON-AI
An ontology of gross anatomy covering metazoa. Works in concert with https://github.com/obophenotype/cell-ontology
Ontology Access Kit: A python library and command line application for working with ontologies
LLM-driven curation assist tool (pre-alpha)
Schema and generated objects for biolink data model and upper ontology
Data transformation framework for LinkML data models
Data ingest application for Monarch Initiative knowledge graph using Koza
A framework for empirical evaluation of phenotype matching and prioritisation
NCATS Translator ARA TRAPI wrapper for the Monarch Initiative system
Medical action ontology
Repository for the GA4GH phenopacket schema
Automated drug repurposing workflow for rare diseases – using Flask, Monarch API, DGIdb API and XGboost.
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