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helper.py
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helper.py
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from __future__ import absolute_import, division, print_function
import cv2
import numpy as np
import torch
import torch.nn as nn
import torch.nn.functional as F
from torch.autograd import Variable
from torchvision import transforms
from models.global_local_ensemble import FPN_GL, get_fpn_global, get_fpn_local, Parallel2Single
from utils.metrics import ConfusionMatrix, AverageMeter
from PIL import Image
# torch.cuda.synchronize()
# torch.backends.cudnn.benchmark = True
torch.backends.cudnn.deterministic = True
transformer = transforms.Compose([
transforms.ToTensor(),
])
def _mask_transform(mask):
target = np.array(mask).astype('int32')
target[target == 255] = -1
# target -= 1 # in DeepGlobe: make class 0 (should be ignored) as -1 (to be ignored in cross_entropy)
return target
def masks_transform(masks, numpy=False):
'''
masks: list of PIL images
'''
targets = []
for m in masks:
targets.append(_mask_transform(m))
targets = np.array(targets)
if numpy:
return targets
else:
return torch.from_numpy(targets).long().cuda()
def images_transform(images):
'''
images: list of PIL images
'''
inputs = []
for img in images:
inputs.append(transformer(img))
inputs = torch.stack(inputs, dim=0).cuda()
return inputs
def one_hot_gaussian_blur(index, classes):
'''
index: numpy array b, h, w
classes: int
'''
mask = np.transpose((np.arange(classes) == index[..., None]).astype(float), (0, 3, 1, 2))
b, c, _, _ = mask.shape
for i in range(b):
for j in range(c):
mask[i][j] = cv2.GaussianBlur(mask[i][j], (0, 0), 8)
return mask
def collate(batch):
batch_dict = {}
for key in batch[0].keys():
batch_dict[key] = [b[key] for b in batch]
for key in batch_dict.keys():
if not (key=='output_size' or key=='id'):
batch_dict[key] = torch.stack(batch_dict[key], dim=0)
return batch_dict
def create_model_load_weights(n_class, mode=1, evaluation=False, path_g=None, path_l=None, path=None, upsample='SemanticFlow'):
if mode == 1:
model = get_fpn_global(n_class, upsample, pretrained=evaluation, path=path_g)
elif mode == 2:
model = get_fpn_local(n_class, upsample, pretrained=evaluation, path=path_l)
elif mode == 3:
model = FPN_GL(n_class, path_g=path_g, path_l=path_l)
if evaluation and path:
state = model.state_dict()
state.update(Parallel2Single(torch.load(path)))
model.load_state_dict(state)
model = nn.DataParallel(model)
model = model.cuda()
return model
def get_optimizer(model, mode=1, learning_rate=2e-5):
optimizer = torch.optim.Adam(model.parameters(), lr=learning_rate, weight_decay=5e-4)
return optimizer
class Trainer(object):
def __init__(self, criterion, optimizer, n_class, sub_batchsize, mode=1, fmreg=0.15):
self.criterion = criterion
self.optimizer = optimizer
self.metrics_global = ConfusionMatrix(n_class)
self.metrics_local = ConfusionMatrix(n_class)
self.metrics = ConfusionMatrix(n_class)
self.n_class = n_class
self.sub_batchsize = sub_batchsize
self.mode = mode
self.fmreg = fmreg # regulization item
def get_scores(self):
score_train = self.metrics.get_scores()
score_train_local = self.metrics_local.get_scores()
score_train_global = self.metrics_global.get_scores()
return score_train, score_train_global, score_train_local
def reset_metrics(self):
self.metrics.reset()
self.metrics_local.reset()
self.metrics_global.reset()
def train(self, sample, model):
model.train()
labels = sample['label'].squeeze(1).long()
labels_npy = np.array(labels)
labels_torch = labels.cuda()
h, w = sample['output_size'][0]
# print(labels[0].size)
if self.mode == 1: # global
img_g = sample['image_g'].cuda()
outputs_g = model.forward(img_g)
outputs_g = F.interpolate(outputs_g, size=(h, w), mode='bilinear')
# print(outputs_g.size(), labels_torch.size())
loss = self.criterion(outputs_g, labels_torch)
loss.backward()
self.optimizer.step()
self.optimizer.zero_grad()
if self.mode == 2: # local
img_l = sample['image_l'].cuda()
batch_size = img_l.size(0)
idx = 0
outputs_l = []
while idx+self.sub_batchsize <= batch_size:
output_l = model.forward(img_l[idx:idx+self.sub_batchsize])
output_l = F.interpolate(output_l, size=(h, w), mode='bilinear')
outputs_l.append(output_l)
loss = self.criterion(output_l, labels_torch[idx:idx+self.sub_batchsize])
loss.backward()
idx += self.sub_batchsize
outputs_l = torch.cat(outputs_l, dim=0)
self.optimizer.step()
self.optimizer.zero_grad()
if self.mode == 3: # global&local
img_g = sample['image_g'].cuda()
img_l = sample['image_l'].cuda()
batch_size = img_l.size(0)
idx = 0
outputs = []; outputs_g = []; outputs_l = []
while idx+self.sub_batchsize <= batch_size:
output, output_g, output_l, mse = model.forward(img_g[idx:idx+self.sub_batchsize], img_l[idx:idx+self.sub_batchsize], target=labels_torch[idx:idx+self.sub_batchsize])
outputs.append(output); outputs_g.append(output_g); outputs_l.append(output_l)
loss = 2* self.criterion(output, labels_torch[idx:idx+self.sub_batchsize]) + self.criterion(output_g, labels_torch[idx:idx+self.sub_batchsize]) + \
self.criterion(output_l, labels_torch[idx:idx+self.sub_batchsize]) + self.fmreg * mse
loss.backward()
idx += self.sub_batchsize
outputs = torch.cat(outputs, dim=0); outputs_g = torch.cat(outputs_g, dim=0); outputs_l = torch.cat(outputs_l, dim=0)
self.optimizer.step()
self.optimizer.zero_grad()
# predictions
if self.mode == 1:
outputs_g = outputs_g.cpu()
predictions_global = [outputs_g[i:i+1].argmax(1).detach().numpy() for i in range(len(labels))]
self.metrics_global.update(labels_npy, predictions_global)
if self.mode == 2:
outputs_l = outputs_l.cpu()
predictions_local = [outputs_l[i:i+1].argmax(1).detach().numpy() for i in range(len(labels))]
self.metrics_local.update(labels_npy, predictions_local)
if self.mode == 3:
outputs_g = outputs_g.cpu(); outputs_l = outputs_l.cpu(); outputs = outputs.cpu()
predictions_global = [outputs_g[i:i+1].argmax(1).detach().numpy() for i in range(len(labels))]
predictions_local = [outputs_l[i:i+1].argmax(1).detach().numpy() for i in range(len(labels))]
predictions = [outputs[i:i+1].argmax(1).detach().numpy() for i in range(len(labels))]
self.metrics_global.update(labels_npy, predictions_global)
self.metrics_local.update(labels_npy, predictions_local)
self.metrics.update(labels_npy, predictions)
return loss
class Evaluator(object):
def __init__(self, n_class, sub_batchsize, mode=1, test=False):
self.metrics_global = ConfusionMatrix(n_class)
self.metrics_local = ConfusionMatrix(n_class)
self.metrics = ConfusionMatrix(n_class)
self.n_class = n_class
self.sub_batchsize = sub_batchsize
self.mode = mode
self.test = test
def get_scores(self):
score_train = self.metrics.get_scores()
score_train_local = self.metrics_local.get_scores()
score_train_global = self.metrics_global.get_scores()
return score_train, score_train_global, score_train_local
def reset_metrics(self):
self.metrics.reset()
self.metrics_local.reset()
self.metrics_global.reset()
def eval_test(self, sample, model):
with torch.no_grad():
ids = sample['id']
h, w = sample['output_size'][0]
if not self.test:
labels = sample['label'].squeeze(1).long()
labels_npy = np.array(labels)
if self.mode == 1: # global
img_g = sample['image_g'].cuda()
outputs_g = model.forward(img_g)
outputs_g = F.interpolate(outputs_g, size=(h, w), mode='bilinear')
if self.mode == 2: # local
img_l = sample['image_l'].cuda()
batch_size = img_l.size(0)
idx = 0
outputs_l = []
while idx+self.sub_batchsize <= batch_size:
output_l = model.forward(img_l[idx:idx+self.sub_batchsize])
output_l = F.interpolate(output_l, size=(h, w), mode='bilinear')
outputs_l.append(output_l)
idx += self.sub_batchsize
outputs_l = torch.cat(outputs_l, dim=0)
if self.mode == 3: # global&local
img_g = sample['image_g'].cuda()
img_l = sample['image_l'].cuda()
batch_size = img_l.size(0)
idx = 0
outputs = []; outputs_g = []; outputs_l = []
while idx+self.sub_batchsize <= batch_size:
output, output_g, output_l, mse = model.forward(img_g[idx:idx+self.sub_batchsize], img_l[idx:idx+self.sub_batchsize])
outputs.append(output); outputs_g.append(output_g); outputs_l.append(output_l)
idx += self.sub_batchsize
outputs = torch.cat(outputs, dim=0); outputs_g = torch.cat(outputs_g, dim=0); outputs_l = torch.cat(outputs_l, dim=0)
# no target
# outputs, outputs_g, outputs_l, mse = model.forward(img_g, img_l)
# predictions
if self.mode == 1:
outputs_g = outputs_g.cpu()
predictions_global = [outputs_g[i:i+1].argmax(1).detach().numpy() for i in range(len(labels))]
if not self.test:
self.metrics_global.update(labels_npy, predictions_global)
return None, predictions_global, None
if self.mode == 2:
outputs_l = outputs_l.cpu()
predictions_local = [outputs_l[i:i+1].argmax(1).detach().numpy() for i in range(len(labels))]
if not self.test:
self.metrics_local.update(labels_npy, predictions_local)
return None, None, predictions_local
if self.mode == 3:
outputs_g = outputs_g.cpu(); outputs_l = outputs_l.cpu(); outputs = outputs.cpu()
predictions_global = [outputs_g[i:i+1].argmax(1).detach().numpy() for i in range(len(labels))]
predictions_local = [outputs_l[i:i+1].argmax(1).detach().numpy() for i in range(len(labels))]
predictions = [outputs[i:i+1].argmax(1).detach().numpy() for i in range(len(labels))]
if not self.test:
self.metrics_global.update(labels_npy, predictions_global)
self.metrics_local.update(labels_npy, predictions_local)
self.metrics.update(labels_npy, predictions)
return predictions, predictions_global, predictions_local