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  • pypropel Public

    Protein data pre- and post-processing

    Python MIT License Updated Sep 9, 2024
  • mclumi Public

    Markov clustering for dynamic UMI deduplication and collapsing

    Python MIT License Updated Aug 1, 2024
  • pcser Public

    Protein corona stealth effect prediction with machine learning

    Jupyter Notebook GNU General Public License v3.0 Updated Jul 31, 2024
  • umiche Public

    A comprehensive platform for UMI-associated analysis

    Python MIT License Updated Jul 31, 2024
  • tresor Public

    Transcriptomic read and sequencing library simulation tool

    Python MIT License Updated Jul 26, 2024
  • deepsmirud Public

    DeepsmirUD predicts small molecule-mediated regulatory effects on miRNA expression with 12 AI methods

    Python 3 1 MIT License Updated Feb 1, 2024
  • tmkit Public

    Transmembrane protein analysis toolkit

    Python 3 GNU General Public License v3.0 Updated Jan 19, 2024
  • tmkit-guide Public

    Blade GNU General Public License v3.0 Updated Jan 18, 2024
  • Github Action to deploy conda package to Anaconda repository

    Shell MIT License Updated Dec 27, 2023
  • Computational tool for UMI deduplication and artifact removal

    Python 1 MIT License Updated Jun 16, 2023
  • deepdlncud Public

    DeepdlncUD is used to predict the regulation types of small molecules on modulating lncRNA expression, which is powered by 9 deep learning models.

    Python 1 2 Updated Apr 11, 2023
  • drutai Public

    Drutai is used to predict interactions between drugs and targets

    Python Updated Mar 18, 2023
  • deephelicon Public

    DeepHelicon predicts inter-helical residue contacts in transmembrane proteins.

    Python 4 GNU General Public License v3.0 Updated Jun 22, 2022
  • deeptminter Public

    DeepTMInter predicts interaction sites between transmembrane proteins.

    Python 3 1 GNU General Public License v3.0 Updated May 3, 2021
  • ridgesen Public

    RidgeSen for the ridge regression analysis of Beijing economy sensitivity of nine industries to the changes of meteorological factors.

    Jupyter Notebook GNU General Public License v3.0 Updated Apr 13, 2021