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added DeepDDI and fixed location issues
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sbonner0 committed Oct 20, 2021
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- [[Paper]](https://pubmed.ncbi.nlm.nih.gov/29126136/)
- [[Dataset]](https://go.drugbank.com/)

#### 2017
- **(DeepDDI) Deep learning improves prediction of drug–drug and drug–food interactions (PNAS 2018)**
- Ryu, Jae Yong, Hyun Uk Kim, and Sang Yup Lee.
- [[Paper]](https://www.pnas.org/content/115/18/E4304.short)
- [[Dataset]](https://zenodo.org/record/1205795#.YVbsCi8w1tY)

- **(ZhangDDI) Predicting potential drug-drug interactions by integrating chemical, biological,phenotypic and network data (Bioinformatics 2017)**
- Zhang, Wen, Yanlin Chen, Feng Liu, Fei Luo, Gang Tian, and Xiaohong Li.
- [[Paper]](https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-016-1415-9)
- [[Dataset]](https://github.com/zw9977129/drug-drug-interaction/tree/master/dataset)

#### 2012

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- Marinka Zitnik, Rok Sosivc, Sagar Maheshwari, and Jure Leskovec
- [[Dataset]](https://snap.stanford.edu/biodata/datasets/10001/10001-ChCh-Miner.html)

#### 2017

- **(ZhangDDI) Predicting potential drug-drug interactions by integrating chemical, biological,phenotypic and network data (Bioinformatics 2017)**
- Zhang, Wen, Yanlin Chen, Feng Liu, Fei Luo, Gang Tian, and Xiaohong Li.
- [[Paper]](https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-016-1415-9)
- [[Dataset]](https://github.com/zw9977129/drug-drug-interaction/tree/master/dataset)

#### 2016

- **(STITCH CCI) - STITCH 5: augmenting protein--chemical interaction networks with tissue and affinity data (Nucleic Acids Research 2018)**
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