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# DNA Data Storage Channel Model with Nanopore sequencing
# Channel Model with Memory for DNA Data Storage with Nanopore Sequencing

Simulator to simulate the entire DNA Data Storage process (from synthesis to basecalling)

The Channel Model with Memory for DNA Data Storage with Nanopore Sequencing is published in ISTC2021 conference. If you use this Simulator in your research, please cite this manuscript:
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> B. Hamoum, E. Dupraz, L. Conde-Canencia, and D. Lavenier,“Channel Model with Memory for DNA Data Storage with NanoporeSequencing,” in ISTC 2021 - 11th International Symposium on Topics in Coding. Montreal, Canada: IEEE, Aug. 2021, pp. 1–5. (https://hal.archives-ouvertes.fr/hal-03337117/).
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This is the first version of the Channel Model with Memory for DNA Data Storage with Nanopore Sequencing based on Julia (https://julialang.org/downloads/).
Julia was used with 1.5.3 version and recent ones should also be compatible (tested until v1.6.2).

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