feat: changes to support numpy 2.0; better handling of non-zero retur…

…n codes from external programs

Support gzipped protein files as input (thanks to alienzj for the PR)

Bumped version number.

Modified how bin IDs are identified to improve output tables

Merge branch 'master' of https://github.com/Ecogenomics/CheckM

Merge branch 'master' of https://github.com/Ecogenomics/CheckM

fixed support for gzip input FASTA files

- accepted PRs allowing bins to be specified via an input table, fixi…

…ng import error with prettytable, and enhancing identification of bins via their extension

- accepted PRs allowing bins to be specified via an input table, fixi…

…ng import error with prettytable, and enhancing identification of bins via their extension

Allow CheckM data path to be set through the environmental variable C…

…HECKM_DATA_PATH