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The University of Melbourne
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- https://www.linkedin.com/in/farahzk/
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topmed-workflows Public
Forked from DataBiosphere/topmed-workflowsa place for topmed workflows
WDL BSD 3-Clause "New" or "Revised" License UpdatedDec 4, 2018 -
GATK-CaseStudy Public
Forked from skanwal/GATK-CaseStudyGATK Variant Calling Workflow using Galaxy, CWL and Cpipe
Common Workflow Language MIT License UpdatedNov 22, 2018 -
ebi-metagenomics-cwl Public
Forked from EBI-Metagenomics/ebi-metagenomics-cwlThis repository contains the CWL description of EBI Metagenomics pipeline
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test_bcbio_cwl Public
Forked from bcbio/test_bcbio_cwlTest workflows, run scripts and data for bcbio Common Workflow Language integration
Common Workflow Language UpdatedSep 25, 2018 -
cwl_workflows Public
Forked from heliumdatacommons/TOPMed_RNAseq_CWLExample CWL Workflows that run on team Helium PIVOT architecture.
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bcbio_test_cwlprov Public
The content is from an archived version from the documentation here: https://bcbio-nextgen.readthedocs.io/en/latest/contents/cwl.html#install-bcbio-vm-with-containers
Common Workflow Language UpdatedSep 14, 2018 -
cwlprov-py Public
Forked from common-workflow-language/cwlprov-pyCWLProv toolkit
Python Apache License 2.0 UpdatedSep 13, 2018 -
cwlprov Public
Forked from common-workflow-language/cwlprovProfile for provenance research object of a CWL workflow run
Apache License 2.0 UpdatedJul 19, 2018 -
bcbio_validation_workflows Public
Forked from bcbio/bcbio_validation_workflowsA community menagarie of automated variant validations using bcbio and the Common Workflow Language
Common Workflow Language UpdatedJun 12, 2018 -
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toil Public
Forked from DataBiosphere/toilA scalable, efficient, cross-platform and easy-to-use workflow engine in pure Python
Python Other UpdatedApr 10, 2018 -
scalability-reproducibility-chapter Public
Forked from EvolutionaryGenomics/scalability-reproducibility-chapterData and workflow examples
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workflows Public
Forked from common-workflow-library/legacyCommunity maintained workflows & tools (with examples)
Python Apache License 2.0 UpdatedAug 24, 2016 -
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gvl-melbgenomics-deploy Public
Forked from skanwal/gvl-melbgenomics-deployScripts for creating flavours of Cpipe and LOVD for the GVL
UpdatedJun 5, 2015