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@GenomicMedLab

The Wagner/Chaudhari Laboratories at the Institute for Genomic Medicine

The Wagner and Chaudhari Laboratories develop methods and tools for translating genomic variation in patients to clinical actionability

Popular repositories Loading

  1. cool-seq-tool cool-seq-tool Public

    Python 4

  2. variation-normalizer-manuscript variation-normalizer-manuscript Public

    Issue tracker for Variation Normalizer manuscript work

    Jupyter Notebook 2

  3. agct agct Public

    Another Genome Conversion Tool: Python frontend to Rust chainfile crate

    Python 2

  4. preferredlist preferredlist Public

    Lists of genes and hotspots for filter pass-through inspection in variant interpretation

    1

  5. r-dgidb r-dgidb Public

    In-progress R wrapper for DGIdb

    R 1

  6. fantasy-football-rulebook fantasy-football-rulebook Public

    Rulebook for the annual Griffith / Wagner Labs Fantasy Football League

    1

Repositories

Showing 10 of 29 repositories
  • gregor Public

    Handle GREGoR Consortium tasks/code

    GenomicMedLab/gregor’s past year of commit activity
    Rust 0 MIT 0 10 0 Updated Oct 2, 2024
  • wags-tails Public

    Data acquisition tools for Wagnerds

    GenomicMedLab/wags-tails’s past year of commit activity
    Python 0 MIT 0 14 1 Updated Sep 30, 2024
  • r-dgidb Public

    In-progress R wrapper for DGIdb

    GenomicMedLab/r-dgidb’s past year of commit activity
    R 1 0 4 0 Updated Sep 27, 2024
  • cool-seq-tool Public
    GenomicMedLab/cool-seq-tool’s past year of commit activity
    Python 4 MIT 0 37 0 Updated Sep 26, 2024
  • seqrepo-rest-service Public Forked from biocommons/seqrepo-rest-service

    OpenAPI-based REST interface to biological sequences and sequence metadata

    GenomicMedLab/seqrepo-rest-service’s past year of commit activity
    Python 0 Apache-2.0 5 0 0 Updated Sep 25, 2024
  • software-templates Public

    Cookiecutter templates for lab software projects

    GenomicMedLab/software-templates’s past year of commit activity
    Python 0 MIT 0 14 0 Updated Sep 23, 2024
  • regbot Public
    GenomicMedLab/regbot’s past year of commit activity
    Python 0 MIT 0 2 0 Updated Sep 23, 2024
  • dgipy Public

    Python client for fast access to the Drug-Gene Interaction Database (DGIDb)

    GenomicMedLab/dgipy’s past year of commit activity
    Python 0 MIT 0 14 1 Updated Sep 20, 2024
  • fda-nlp Public
    GenomicMedLab/fda-nlp’s past year of commit activity
    Jupyter Notebook 0 MIT 0 7 0 Updated Sep 18, 2024
  • vrs-annotator Public Forked from ohsu-comp-bio/vrs-annotator

    Annotates VCF Variants with VRS IDs

    GenomicMedLab/vrs-annotator’s past year of commit activity
    Jupyter Notebook 0 3 0 0 Updated Sep 12, 2024
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