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bazlets: Replace native.git_repository with skylark rule
The native.git_repository rule does not work properly when invoked in a `git submodule foreach` command. Bazel will deprecate the native rules anyway, so replace with skylark's git_repository. See [1] for context. [1] bazelbuild/bazel#6358 (comment) Change-Id: I97492855b99991e9812b07ed2851a31d67be3aea
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