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Issues list

The function "available_projects()" returns error
#53 by angelovelle96 was closed May 10, 2024
2
Unable to access or download data
#52 by MB571 was closed Feb 19, 2024
1
[BUG] Error in collect(): bug Something isn't working
#39 by ndaniel was closed Mar 23, 2024
6
Error in match.arg(project_home) bug Something isn't working cannot reproduce
#38 by kayserb was closed Dec 8, 2023
2
use metadata to select samples from rse
#37 by talkhanz was closed Oct 23, 2023
How to distinguish normal and cancer samples from TCGA?
#36 by LiangShaw was closed Sep 20, 2023
1
Identify the label in the datasets invalid This doesn't seem right
#33 by kolskydor was closed Nov 30, 2023
2
[BUG] 'recount3_url' is not a valid supported URL
#32 by uuihbgg1 was closed May 6, 2023
2
Error: 'recount3_url' is not a valid supported URL when I run "human_projects <- available_projects()"
#31 by bitmman was closed Mar 9, 2023
2
[BUG] Is data server functional?
#29 by adc0032 was closed Jan 11, 2023
40
[Feature Request] What is the quickest way to harmonized my dataset to recount3
#28 by ahdee was closed Nov 3, 2022
1
is recount3 server down?
#26 by ahdee was closed Nov 1, 2022
4
deseq 2 with RSE
#25 by lfperales was closed May 6, 2023
2
TCGA data: how do you generate the metadata?
#24 by bandrewfox was closed Jul 2, 2022
1
recount3_url' is not a valid supported URL
#23 by xiangwei6963 was closed Aug 22, 2022
11
Data unavailable right now
#22 by lcolladotor was closed May 9, 2022
8
[BUG] GTEx broken bigwig download via locate_url
#21 by davemcg was closed Mar 21, 2022
2
hg19 Reference Build Option
#20 by aobermayer4 was closed Mar 2, 2022
2
Data including metadata and annotation data unavailable for human projects
#19 by lonsbio was closed Mar 21, 2022
13
Consider releasing the transcript counts
#18 by lcolladotor was closed May 6, 2023
5
Update the CITATION
#17 by lcolladotor was closed Mar 21, 2022
@lcolladotor
GTEx BLOOD VESSEL study TPM failing
#15 by MahmoudZidan96 was closed Feb 23, 2022
6
Unable to download a few SRA studies
#14 by prashanthi-ravichandran was closed Jan 28, 2022
5
[BUG] SRP167447's suspiciously large library sizes (raw counts, by gene, gencode_v29)
#12 by johnmoll was closed Dec 1, 2021
3
sra_attributes : sra.run_alias explanation
#10 by PinaColadast was closed Nov 23, 2021
1
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