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Issues list

Switch to using rlang and cli enhancement New feature or request
#51 opened Dec 1, 2023 by lcolladotor updated Dec 1, 2023 bioc v3.21
Add more data to recount3 depends on new monorail output enhancement New feature or request
#50 opened Dec 1, 2023 by lcolladotor updated Dec 1, 2023
4 tasks
Translate course and intro documentation to Spanish enhancement New feature or request
#49 opened Dec 1, 2023 by lcolladotor updated Dec 1, 2023 bioc v3.23
Short videos + guide collating them enhancement New feature or request
#48 opened Dec 1, 2023 by lcolladotor updated Dec 1, 2023 bioc v3.23
Develop a 2 day (max 3) workshop / short course enhancement New feature or request
#47 opened Dec 1, 2023 by lcolladotor updated Dec 1, 2023 bioc v3.22
Create guides for GTEx and TCGA data enhancement New feature or request
#46 opened Dec 1, 2023 by lcolladotor updated Dec 1, 2023 bioc v3.22
Split documentation to simplify onboarding process for new users enhancement New feature or request
#45 opened Dec 1, 2023 by lcolladotor updated Dec 1, 2023 bioc v3.21
Guide for creating and potentially sharing collections enhancement New feature or request
#44 opened Dec 1, 2023 by lcolladotor updated Dec 1, 2023 bioc v3.21
Add recount-brain collection to recount3 enhancement New feature or request
#43 opened Dec 1, 2023 by lcolladotor updated Dec 1, 2023 bioc v3.21
Upload recount3 data to AnVIL enhancement New feature or request
#42 opened Dec 1, 2023 by lcolladotor updated Dec 1, 2023 bioc v3.21
Add support for data hosted in AnVIL enhancement New feature or request
#41 opened Nov 30, 2023 by lcolladotor updated Nov 30, 2023 bioc v3.21
[Feature Request] Restore information from Matrix Market files in recount3 question Further information is requested
#40 opened Nov 28, 2023 by jiapeiyuan17 updated Nov 30, 2023
3
RNAseq datasets unavailable depends on new monorail output
#13 opened Dec 6, 2021 by danielemalpetti updated Nov 30, 2023
2
recount::getTPM(rse) method bug Something isn't working
#30 opened Jan 16, 2023 by SoniaRuiz updated Nov 30, 2023
1 task
bioc v3.20
2
Error when loading an SRA project - "'NA' indices are not (yet?) supported for sparse Matrices" bug Something isn't working
#34 opened Jul 21, 2023 by aobermayer4 updated Nov 30, 2023 bioc v3.20
[BUG] different row counts implied by arguments error at expand_sra_attributes() bug Something isn't working
#35 opened Aug 23, 2023 by ivokwee updated Nov 30, 2023 bioc v3.20
2
[FEATURE] Subsetting SRA projects by samples prior to making the RangedSummarizedExperiment object enhancement New feature or request
#11 opened Nov 29, 2021 by schelhorn updated Nov 30, 2023 bioc v3.20
Make the organism and annotation options more general enhancement New feature or request
#16 opened Feb 28, 2022 by lcolladotor updated Nov 30, 2023 bioc v3.21
@lcolladotor
annotation version / genome enhancement New feature or request
#1 opened Aug 17, 2020 by kasperdanielhansen updated Nov 30, 2023 bioc v3.20
1
ProTip! Exclude everything labeled bug with -label:bug.