Create kriged apportioned abundance documentation #216
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https://github.com/brandynlucca/EchoPro into brandynlucca_WIP_kriging_abundance_apportionment_docs
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There's some weird missing ")" in the functions that is probably not used -- see https://github.com/OSOceanAcoustics/echopop/actions/runs/8455613434/job/23163503465?pr=216 I think it'll be good to resolve that before we merge this PR so that the |
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Ok, so I think you branched out after you did the code changes, so the 2 PRs are mingled. I fixed it by removing the 2 testing_* files and fixed the missing ")" just so that this PR is clean. |
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See #218 for indexing! |
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I did a PR to fix the indexing problems and simplified the text in brandynlucca#6.
I also created an issue #279 to reconcile repeated materials and notation differences between the 2 apportioning pages -- I'll take that on once this one is merged.
This includes a draft of the
apportion_abundancedocument that covers how kriged biomass is reallocated into estimates of abundance, which is not to be confused with apportioning abundance estimates that were, themselves, kriged. A variety of images have been included that can be swapped out for equations.