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Model is predicting low numbers for nearly all lineages #497
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Looks like the molecular clock model residuals are off as well. |
Default display has been switched back to divergence by @GopiGugan |
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new branch |
I'll try to wrap up some of this refactoring and then I may need to hand this off to someone else |
@GopiGugan can you please retrieve |
Obtained CSV from @GopiGugan, will analyze |
The issue seems to be that there is a small number of outlier lineages with very high predicted numbers of infections. For the diagnostic |
A log-transform on mapping predicted numbers of infections to the colour scale should resolve this on the front end |
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