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Issues list

add_rel bug
#26 by saramsey was closed Mar 25, 2018 updated Mar 25, 2018
@saramsey
change "pharos_drug" to "drug" in BioNetExpander, BuildMasterKG, and Q2Utils.py enhancement low priority
#7 by dkoslicki was closed Apr 2, 2018 updated Apr 2, 2018
@saramsey
4
Some drugs missing from new standardized KG
#62 by dkoslicki was closed Apr 13, 2018 updated Apr 13, 2018
@saramsey
4
set up Neo4j in a second docker container on rtx.ncats.io
#73 by saramsey was closed Apr 19, 2018 updated Apr 19, 2018
@saramsey
3
bug in QueryMyGeneExtended
#82 by saramsey was closed Apr 20, 2018 updated Apr 20, 2018
@saramsey
1
Additional node properties for standardization standardization
#80 by dkoslicki was closed Apr 23, 2018 updated Apr 23, 2018
@saramsey
2
model organism proteins are showing up in the KG
#94 by saramsey was closed Apr 26, 2018 updated Apr 26, 2018
@saramsey
4
Errors in curie_id property of nodes in KG
#74 by finnagin was closed Apr 26, 2018 updated Apr 26, 2018
@saramsey
10
get "symbol" field in the KG enhancement high priority standardization
#87 by saramsey was closed Apr 26, 2018 updated Apr 26, 2018
@saramsey
3
Need curie id's for the edges, and additional properties for standardization standardization
#79 by dkoslicki was closed Apr 26, 2018 updated Apr 26, 2018
@saramsey
4
Some nodes have no edges enhancement low priority
#84 by dkoslicki was closed Apr 26, 2018 updated Apr 26, 2018
@saramsey
6
get "description" field for each node enhancement high priority
#81 by saramsey was closed May 1, 2018 updated May 1, 2018
@DeqingQu @saramsey
10
Still getting internal server errors
#98 by dkoslicki was closed May 1, 2018 updated May 1, 2018
@saramsey @edeutsch
7
expose python methods for getting medical record co-occurrence frequencies, from COHD enhancement high priority
#91 by saramsey was closed May 2, 2018 updated May 2, 2018
@DeqingQu @saramsey
10
Compile list of data/knowledge sources being used by RTX
#97 by inter-apero-bility was closed May 4, 2018 updated May 4, 2018
@saramsey
9
have BuildMasterKG load a single TSV file of "seed nodes" enhancement
#48 by saramsey was closed May 4, 2018 updated May 4, 2018
@saramsey
2
unhandled exception in QueryMyGene module
#106 by saramsey was closed May 4, 2018 updated May 4, 2018
@saramsey
KeyError in QueryMyGene bug
#111 by saramsey was closed May 6, 2018 updated May 6, 2018
@saramsey
Connect GO terms to phenotypes and/or diseases and/or anatomy. enhancement high priority
#75 by dkoslicki was closed May 9, 2018 updated May 9, 2018
@saramsey
4
Node with name "disease" question
#126 by dkoslicki was closed May 9, 2018 updated May 9, 2018
@saramsey
13
There non-human proteins showing up in the KG bug low priority question
#21 by dkoslicki was closed May 9, 2018 updated May 9, 2018
@saramsey
18
Missing/different curie identifier prefixes? question
#109 by dkoslicki was closed May 9, 2018 updated May 9, 2018
@saramsey
14
provide complete list of KG node names to Ohio State
#129 by saramsey was closed May 15, 2018 updated May 15, 2018
@saramsey
3
check that these diseases are in our KG high priority
#85 by saramsey was closed May 5, 2018 updated May 15, 2018
@DeqingQu @saramsey @finnagin
11
A lot of nodes have description UNKNOWN which is unsightly in GUI
#140 by edeutsch was closed May 17, 2018 updated May 17, 2018
@DeqingQu @saramsey @isbluis
7
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