A versatile pairwise aligner for genomic and spliced nucleotide sequences

Toolkit for processing sequences in FASTA/Q formats

Open-source foundation of the user-sponsored PyMOL molecular visualization system.

Official home of genome aligner based upon notion of Cactus graphs

HMMER: biological sequence analysis using profile HMMs

haplotypic duplication identification tool

PAML is a program package for model fitting and phylogenetic tree reconstruction using DNA and protein sequence data. Please report only **technical issues** on this repository (e.g., compiling, pr…

EasyCodeML: A visual tool for analysis of selection using CodeML