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@UtrechtUniversity

Utrecht University

The central place for managing code and software for Utrecht University researchers and employees

Welcome to Utrecht University 👋

Welcome at GitHub@UtrechtUniversity! At Utrecht University, we believe that with open minds, open attitudes and open science, we can create solutions that positively impact us all. Nowadays, technology, data, and software are important cornerstones of these solutions. This GitHub is our place where we, academic and administrative staff, develop and share research code, software, and others. You are invited to contribute to the projects and join forces to a better world.

🔑 I work at Utrecht University and want access!

    The GitHub@UtrechtUniversity is open to all researchers, teachers, and employees of Utrecht University. You can get access with your Utrecht University SolisID. After becoming a member you can create Repositories and Teams under the UU GitHub organization. Step-by-step instructions can be found in the Getting Started with GitHub@UtrechtUniversity guide.

    Do you have no experience with Git and GitHub? There are lots of resources on the internet to learn working with Git and GitHub. Do you prefer a workshop? The workshop Best Practices for Writing Reproducible Code of the Research Data Management Support office is a great starting point.

    The GitHub Education program provides benefits (free developer tools such as GitHub Copilot) for students and teachers. Are you a PhD candidate? You can request a Student Developer pack by sending an email to info.rdm@uu.nl. Postdoctoral researchers and permanent staff may apply for teacher benefits via GitHub Education.

🔑 I study at Utrecht University and want to use GitHub!

    To apply for student benefits (Student Developer pack, GitHub Pro and GitHub Copilot) send an email to info.rdm@uu.nl.

    Do you have no experience with Git and GitHub? There are lots of resources on the internet to learn working with Git and GitHub. Check our best practices repository as a starting point.

    Students are not eligible to become a full member of github.com/UtrechtUniversity, but can be invited as 'outside collaborators' to project Repositories by repository admins (e.g. the creator of a repository). Repository admins can grant students full access to the repository including write and admin permissions, when required.

Our projects

Every year, researchers at Utrecht University publish thousands of scientific results via various outlets. Research code and software is published on GitHub@UtrechtUniversity as well as other locations such as scientific repositories and personal GitHub accounts. To find interesting code and software published by Utrecht University, have a look at:

Featured projects this week

          

These are featured projects. How can I have my project featured?

Contributing

At Utrecht University, we love 💛 Open Science. This means that we are welcoming contributions to our projects at Utrecht University. Are you interested in contributing? Cool! Do you need help? We can help you get started! Open source software is made by people just like you. Learn more about how to contribute.

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  1. getting-started getting-started Public

    Getting started with GitHub @UtrechtUniversity

    14 4

  2. best-practices best-practices Public

    Best practices for git, GitHub, and research software development. Tailored for researchers of Utrecht University

    9 2

  3. awesome-utrecht-university awesome-utrecht-university Public

    A curated list of awesome open source projects from Utrecht University.

    Python 46 10

  4. yoda yoda Public

    A system for reliable, long-term storing and archiving large amounts of research data during all stages of a study.

    HTML 42 26

  5. SWORDS-UU SWORDS-UU Public

    Implementation of the SWORDS framework for Utrecht University.

    Jupyter Notebook 8 6

  6. SWORDS-template SWORDS-template Public template

    Template to implement the SWORDS framework for your organisation

    Python 4 5

Repositories

Showing 10 of 241 repositories
  • UtrechtUniversity/FSW-Openshift’s past year of commit activity
    PHP 0 0 0 2 Updated Jun 28, 2024
  • iBridges Public

    A wrapper around the python-irodsclient to allow for easy interaction with iRODS servers.

    UtrechtUniversity/iBridges’s past year of commit activity
    Python 8 MIT 6 5 4 Updated Jun 28, 2024
  • spring-fever-scraper Public

    Tools for scraping and analyzing content related to the Spring Fever week (Lentekriebels).

    UtrechtUniversity/spring-fever-scraper’s past year of commit activity
    Python 0 EUPL-1.2 0 0 0 Updated Jun 28, 2024
  • yoda-ruleset Public

    iRODS ruleset and policies for Yoda: https://github.com/UtrechtUniversity/yoda

    UtrechtUniversity/yoda-ruleset’s past year of commit activity
    Python 7 GPL-3.0 12 0 4 Updated Jun 28, 2024
  • yoda Public

    A system for reliable, long-term storing and archiving large amounts of research data during all stages of a study.

    UtrechtUniversity/yoda’s past year of commit activity
    HTML 42 GPL-3.0 26 42 3 Updated Jun 28, 2024
  • BayesianEstimation Public

    Github page for the summerschool course "A gentle introduction to Bayesian Estimation"

    UtrechtUniversity/BayesianEstimation’s past year of commit activity
    HTML 2 CC-BY-SA-4.0 2 0 1 Updated Jun 28, 2024
  • animal-sounds Public

    Python modules for detecting Chimpanze sounds in bioacoustic datasets using machine learning and deep learning.

    UtrechtUniversity/animal-sounds’s past year of commit activity
    Jupyter Notebook 9 Apache-2.0 3 6 8 Updated Jun 28, 2024
  • research-engineering Public

    UU Research Engineering team

    UtrechtUniversity/research-engineering’s past year of commit activity
    CSS 6 Apache-2.0 0 1 1 Updated Jun 28, 2024
  • cd2-ansible Public

    Ansible scripts for the deployment of the CD² metadata catalogue

    UtrechtUniversity/cd2-ansible’s past year of commit activity
    0 AGPL-3.0 1 1 0 Updated Jun 28, 2024
  • researchcloud-items Public

    Installation scripts for SURF ResearchCloud catalog components

    UtrechtUniversity/researchcloud-items’s past year of commit activity
    Python 7 GPL-3.0 4 17 0 Updated Jun 27, 2024

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