EphysDataAnalysis

Analysis of Susu dataset at Economo lab BU

Very basic utility functions made so far in zutils.py

LINK TO DATASET

you can download from the link above directly
alternatively, after pip installing dandi you can run the following command:
- dandi download DANDI:000363 -o path/to/output/folder

dandi download DANDI:datasetID
to specify an output path dandi download DANDI:000363 -o output/path/here (NOTE: downloads all data stored in dandi repository)
use a url to the specific dataset you want to download if you don't want to download entire dataset
you can also point to the data via a url rather than downloading. See here: https://pynwb.readthedocs.io/en/stable/tutorials/general/read_basics.html
it seems that you should be able to download one subfolder according to their documention but it doesn't seem to be working. I will look into it - Zach (for now you can manually download trials from the site)

Name		Name	Last commit message	Last commit date
Latest commit History 7 Commits
Preliminary_Plots		Preliminary_Plots
__pycache__		__pycache__
CorrelationData.csv		CorrelationData.csv
CorrelationData.jasp		CorrelationData.jasp
CorrelationData.jasp.tmp		CorrelationData.jasp.tmp
DataExploration.ipynb		DataExploration.ipynb
FiveCorrelations.html		FiveCorrelations.html
FiveCorrelations.jasp		FiveCorrelations.jasp
MetaDataSorting.ipynb		MetaDataSorting.ipynb
Preliminary_Plots.zip		Preliminary_Plots.zip
README.md		README.md
allSessionsMetaData.csv		allSessionsMetaData.csv
annotation_10.nrrd		annotation_10.nrrd
generate_correlation_data.py		generate_correlation_data.py
manifest.json		manifest.json
mapping.ipynb		mapping.ipynb
mrn_analysis.ipynb		mrn_analysis.ipynb
rawMovement.png		rawMovement.png
requirements.txt		requirements.txt
structures.json		structures.json
unit_locations.csv		unit_locations.csv
zach_tests.ipynb		zach_tests.ipynb
zutils.py		zutils.py