A python module for scientific analysis of 3D data based on VTK and Numpy

Source code accompanying O'Reilly book: Machine Learning Design Patterns

Automated VMAT Planning [PMB'21, PMB'23]

Python-based Advanced Numerical Nonlinear Optimization for Radiotherapy

Semi Supervised Learning for Medical Image Segmentation, a collection of literature reviews and code implementations.

An awesome list of helpful resources for students learning MATLAB & Simulink. List includes tips & tricks, tutorials, videos, cheat sheets, and opportunities to learn MATLAB & Simulink.

Opensource radiation treatment planning system in Python [AAPM'23]

The simplest, fastest repository for training/finetuning medium-sized GPTs.

Processing Library and Analysis Toolkit for Medical Imaging in Python

Slicer3D extension for rating using Likert-type score Deep-learning generated segmentations, with segment editor functionality. Created to speed up the validation process done by a clinician - the …

PyRaDiSe: A Python package for DICOM-RT-based auto-segmentation pipeline construction and DICOM-RT data conversion

Code related to Chapter 15 of the book; The evaluation of auto-contouring for radiotherapy

AICONSlab's DL benchmarking platform to OOD data in MRI

This repository contains data readers and examples for the three tracks of the Shifts Dataset and the Shifts Challenge.

A community effort to develop an open standard library for Medical Physics in Python. Building quality transparent software together via peer review and open source distribution. Open code is bette…

Public code repository to reproduce our MICCAI 2022 paper: "Automatic identification of segmentation errors for radiotherapy using geometric learning" (ID: 1361) Pre-print: https://arxiv.org/abs/22…

This repository supports the BENDER series of videos for the MICCAI Education Challenge, 2022.

Latex code for making neural networks diagrams

A logical, reasonably standardized, but flexible project structure for doing and sharing data science work.

A template for small scientific python projects

Open-source toolkit for radiation therapy research, an extension of 3D Slicer. Features include DICOM-RT import/export, dose volume histogram, dose accumulation, external beam planning (TPS), struc…

Drench yourself in Deep Learning, Reinforcement Learning, Machine Learning, Computer Vision, and NLP by learning from these exciting lectures!!

🤘 awesome-semantic-segmentation

NMA Computational Neuroscience course

A collection of loss functions for medical image segmentation

Import and export Darknet™ models within MATLAB deep learning networks.

K3D lets you create 3D plots backed by WebGL with high-level API (surfaces, isosurfaces, voxels, mesh, cloud points, vtk objects, volume renderer, colormaps, etc). The primary aim of K3D-jupyter is…

A curated collection of marketing articles & tools to grow your product.

Simple Matlab package management inspired by pip