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GH-41145: [R][CI] test-r-dev-duckdb fails installing duckdb #41152

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merged 1 commit into from
Apr 11, 2024

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@westonpace westonpace commented Apr 11, 2024

Rationale for this change

An error is received installing R duckdb:

#15 18.13 > remotes::install_github('duckdb/duckdb-r', build = FALSE)
#15 18.27 Error: Failed to install 'unknown package' from **GitHub:**
#15 18.27   Line starting 'Roxyg ...' is malformed!

Some searching seems to suggest that this is because R cannot process UTF-8 characters in DESCRIPTION files if the LANG is set to C.

What changes are included in this PR?

The LANG is set to C.UTF-8 in the dockerfile for this CI job

Are these changes tested?

The change only affects a test

Are there any user-facing changes?

No

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⚠️ GitHub issue #41145 has been automatically assigned in GitHub to PR creator.

@westonpace
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@github-actions crossbow submit test-r-dev-duckdb

@github-actions github-actions bot added the awaiting committer review Awaiting committer review label Apr 11, 2024
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Revision: dc8b10b

Submitted crossbow builds: ursacomputing/crossbow @ actions-609f297d63

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test-r-dev-duckdb GitHub Actions

@kou kou changed the title GH-41145: [R][CI] test-r-dev-duckdb fails installing duckdb #41145 GH-41145: [R][CI] test-r-dev-duckdb fails installing duckdb Apr 11, 2024
@westonpace
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The most recent success appears to be here: https://github.com/ursacomputing/crossbow/actions/runs/8319414856/job/22762704075

The oldest failure is here: https://github.com/ursacomputing/crossbow/actions/runs/8335536023/job/22811196734

So it seems to have failed on March 17th though I cannot find any interesting culprit in the commit log for duckdb-r or dbi in that date range.

@raulcd
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raulcd commented Apr 11, 2024

There were some non-UTF8 additions to the duckdb DESCRIPTION 3 weeks ago, that could be the issue:
duckdb/duckdb-r@30a7d28

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LGTM!

@raulcd raulcd merged commit 6269317 into apache:main Apr 11, 2024
51 checks passed
@raulcd raulcd removed the awaiting committer review Awaiting committer review label Apr 11, 2024
@github-actions github-actions bot added the awaiting merge Awaiting merge label Apr 11, 2024
raulcd pushed a commit that referenced this pull request Apr 11, 2024
### Rationale for this change

An error is received installing R duckdb:

```
#15 18.13 > remotes::install_github('duckdb/duckdb-r', build = FALSE)
#15 18.27 Error: Failed to install 'unknown package' from **GitHub:**
#15 18.27   Line starting 'Roxyg ...' is malformed!
```

Some searching seems to suggest that this is because R cannot process UTF-8 characters in DESCRIPTION files if the `LANG` is set to `C`.

### What changes are included in this PR?

The `LANG` is set to `C.UTF-8` in the dockerfile for this CI job

### Are these changes tested?

The change only affects a test

### Are there any user-facing changes?

No
* GitHub Issue: #41145

Authored-by: Weston Pace <weston.pace@gmail.com>
Signed-off-by: Raúl Cumplido <raulcumplido@gmail.com>
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After merging your PR, Conbench analyzed the 4 benchmarking runs that have been run so far on merge-commit 6269317.

There were no benchmark performance regressions. 🎉

The full Conbench report has more details. It also includes information about 15 possible false positives for unstable benchmarks that are known to sometimes produce them.

vibhatha pushed a commit to vibhatha/arrow that referenced this pull request Apr 15, 2024
…ache#41152)

### Rationale for this change

An error is received installing R duckdb:

```
apache#15 18.13 > remotes::install_github('duckdb/duckdb-r', build = FALSE)
apache#15 18.27 Error: Failed to install 'unknown package' from **GitHub:**
apache#15 18.27   Line starting 'Roxyg ...' is malformed!
```

Some searching seems to suggest that this is because R cannot process UTF-8 characters in DESCRIPTION files if the `LANG` is set to `C`.

### What changes are included in this PR?

The `LANG` is set to `C.UTF-8` in the dockerfile for this CI job

### Are these changes tested?

The change only affects a test

### Are there any user-facing changes?

No
* GitHub Issue: apache#41145

Authored-by: Weston Pace <weston.pace@gmail.com>
Signed-off-by: Raúl Cumplido <raulcumplido@gmail.com>
tolleybot pushed a commit to tmct/arrow that referenced this pull request May 2, 2024
…ache#41152)

### Rationale for this change

An error is received installing R duckdb:

```
apache#15 18.13 > remotes::install_github('duckdb/duckdb-r', build = FALSE)
apache#15 18.27 Error: Failed to install 'unknown package' from **GitHub:**
apache#15 18.27   Line starting 'Roxyg ...' is malformed!
```

Some searching seems to suggest that this is because R cannot process UTF-8 characters in DESCRIPTION files if the `LANG` is set to `C`.

### What changes are included in this PR?

The `LANG` is set to `C.UTF-8` in the dockerfile for this CI job

### Are these changes tested?

The change only affects a test

### Are there any user-facing changes?

No
* GitHub Issue: apache#41145

Authored-by: Weston Pace <weston.pace@gmail.com>
Signed-off-by: Raúl Cumplido <raulcumplido@gmail.com>
vibhatha pushed a commit to vibhatha/arrow that referenced this pull request May 25, 2024
…ache#41152)

### Rationale for this change

An error is received installing R duckdb:

```
apache#15 18.13 > remotes::install_github('duckdb/duckdb-r', build = FALSE)
apache#15 18.27 Error: Failed to install 'unknown package' from **GitHub:**
apache#15 18.27   Line starting 'Roxyg ...' is malformed!
```

Some searching seems to suggest that this is because R cannot process UTF-8 characters in DESCRIPTION files if the `LANG` is set to `C`.

### What changes are included in this PR?

The `LANG` is set to `C.UTF-8` in the dockerfile for this CI job

### Are these changes tested?

The change only affects a test

### Are there any user-facing changes?

No
* GitHub Issue: apache#41145

Authored-by: Weston Pace <weston.pace@gmail.com>
Signed-off-by: Raúl Cumplido <raulcumplido@gmail.com>
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2 participants