Open-source usearch

🍄 Qiime2 ITS classifiers for the UNITE database

Widen, process, and re-tidy a dataset

Identification of shared and specific host-microbiota characteristics in Crohn’s disease and Intestinal tuberculosis using multi-omics integration

🎹 🎻 Camerata Musica website

Bayesian Inferential Regression for Differential Microbiome Analysis

OCRmyPDF adds an OCR text layer to scanned PDF files, allowing them to be searched

Modified RASflow to run on the cluster

RNA-Seq analysis workflow

Project to plot OBD2 car scanner data in interactive visualization of data and location

Data and R code for the manuscript: Temporal variability of microbial response to crude oil exposure in the northern Gulf of Mexico

A list of vendors that treat single sign-on as a luxury feature, not a core security requirement.

🦠 A comprehensive R package for deep mining microbiome

Implementation of Krona to QIIME2

Speedy versions of phyloseq functions

Column scatter / beeswarm-style plots in ggplot2

R package for microbiome biomarker discovery

2D vector & raster editor that melds traditional layers & tools with a modern node-based, non-destructive, procedural workflow.

A visualiser for Blaseball teams over time as a Sankey plot, using Python, the Plotly library and the SIBR Datablase

A Github action for running a Snakemake workflow

upload big files to Zenodo using cURL, jq and bash

GitHub action to validate the Dockerfile usign the dockerlint/hadolint.

Data-sharing repository for Randomized Clinical Trial NCT03893422 conducted by Pendulum Therapeutics.