Added code for anomaly detection

detiuaveiro · Oct 11, 2023 · 0c87147 · 0c87147
1 parent 54bba35
commit 0c87147
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Showing 19 changed files with 3,442 additions and 500 deletions.
diff --git a/notebooks/notebook_00.ipynb → notebooks/00-spam/notebook_00.ipynb b/notebooks/notebook_00.ipynb → notebooks/00-spam/notebook_00.ipynb
diff --git a/notebooks/notebook_01.ipynb → notebooks/00-spam/notebook_01.ipynb b/notebooks/notebook_01.ipynb → notebooks/00-spam/notebook_01.ipynb
@@ -491,7 +491,7 @@
     }
    ],
    "source": [
-    "df = pl.read_csv('../datasets/spam.csv')\n",
+    "df = pl.read_csv('../../datasets/spam.csv')\n",
     "df"
    ]
   },

diff --git a/notebooks/notebook_02.ipynb → notebooks/00-spam/notebook_02.ipynb b/notebooks/notebook_02.ipynb → notebooks/00-spam/notebook_02.ipynb
@@ -127,7 +127,7 @@
     }
    ],
    "source": [
-    "df = pl.read_csv('../datasets/spam.csv')\n",
+    "df = pl.read_csv('../../datasets/spam.csv')\n",
     "df"
    ]
   },

diff --git a/notebooks/notebook_03.ipynb → notebooks/00-spam/notebook_03.ipynb b/notebooks/notebook_03.ipynb → notebooks/00-spam/notebook_03.ipynb
@@ -16,7 +16,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 13,
+   "execution_count": 2,
    "metadata": {},
    "outputs": [],
    "source": [
@@ -44,7 +44,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 24,
+   "execution_count": 3,
    "metadata": {},
    "outputs": [
     {
@@ -120,9 +120,16 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 10,
+   "execution_count": 4,
    "metadata": {},
    "outputs": [
+    {
+     "name": "stderr",
+     "output_type": "stream",
+     "text": [
+      "MovieWriter imagemagick unavailable; using Pillow instead.\n"
+     ]
+    },
     {
      "name": "stdout",
      "output_type": "stream",
@@ -206,34 +213,17 @@
     "    return ax, pbest_plot, p_plot, p_arrow, gbest_plot\n",
     " \n",
     "anim = FuncAnimation(fig, animate, frames=list(range(1,50)), interval=500, blit=False, repeat=True)\n",
-    "anim.save(\"resources/PSO.gif\", dpi=120, writer=\"imagemagick\")\n",
+    "anim.save(\"../resources/PSO.gif\", dpi=120, writer=\"imagemagick\")\n",
     " \n",
     "print(\"PSO found best solution at f({})={}\".format(gbest, gbest_obj))\n",
     "print(\"Global optimal at f({})={}\".format([x_min,y_min], f(x_min,y_min)))"
    ]
   },
   {
-   "cell_type": "code",
-   "execution_count": 11,
+   "cell_type": "markdown",
    "metadata": {},
-   "outputs": [
-    {
-     "data": {
-      "text/html": [
-       "<img src=\"resources/PSO.gif\" />"
-      ],
-      "text/plain": [
-       "<IPython.core.display.HTML object>"
-      ]
-     },
-     "execution_count": 11,
-     "metadata": {},
-     "output_type": "execute_result"
-    }
-   ],
    "source": [
-    "# Displaying animation\n",
-    "HTML('<img src=\"resources/PSO.gif\" />')"
+    "![title](../resources/PSO.gif)"
    ]
   },
   {
@@ -264,7 +254,7 @@
    "name": "python",
    "nbconvert_exporter": "python",
    "pygments_lexer": "ipython3",
-   "version": "3.9.18"
+   "version": "3.10.12"
   },
   "orig_nbformat": 4
  },

diff --git a/notebooks/00-spam/notebook_04.ipynb b/notebooks/00-spam/notebook_04.ipynb
diff --git a/notebooks/notebook_05.ipynb → notebooks/00-spam/notebook_05.ipynb b/notebooks/notebook_05.ipynb → notebooks/00-spam/notebook_05.ipynb
@@ -33,7 +33,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 30,
+   "execution_count": 1,
    "metadata": {},
    "outputs": [],
    "source": [
@@ -60,7 +60,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 31,
+   "execution_count": 2,
    "metadata": {},
    "outputs": [],
    "source": [
@@ -70,7 +70,7 @@
   },
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    "cell_type": "code",
-   "execution_count": 32,
+   "execution_count": 3,
    "metadata": {},
    "outputs": [],
    "source": [
@@ -79,7 +79,7 @@
   },
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    "cell_type": "code",
-   "execution_count": 33,
+   "execution_count": 4,
    "metadata": {},
    "outputs": [
     {
@@ -101,7 +101,7 @@
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   {
    "cell_type": "code",
-   "execution_count": 34,
+   "execution_count": 5,
    "metadata": {},
    "outputs": [],
    "source": [
@@ -131,21 +131,14 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 35,
+   "execution_count": 6,
    "metadata": {},
    "outputs": [
     {
      "name": "stderr",
      "output_type": "stream",
      "text": [
-      "  0%|          | 0/300 [00:00<?, ?it/s]"
-     ]
-    },
-    {
-     "name": "stderr",
-     "output_type": "stream",
-     "text": [
-      "100%|██████████| 300/300 [00:03<00:00, 90.32it/s]"
+      "100%|██████████| 300/300 [00:03<00:00, 90.18it/s]"
      ]
     },
     {
@@ -171,7 +164,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 36,
+   "execution_count": 7,
    "metadata": {},
    "outputs": [
     {
@@ -195,7 +188,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 37,
+   "execution_count": 8,
    "metadata": {},
    "outputs": [
     {
@@ -213,7 +206,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 38,
+   "execution_count": 9,
    "metadata": {},
    "outputs": [],
    "source": [
@@ -249,14 +242,14 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 39,
+   "execution_count": 10,
    "metadata": {},
    "outputs": [
     {
      "name": "stderr",
      "output_type": "stream",
      "text": [
-      "100%|██████████| 1000/1000 [00:00<00:00, 84548.94it/s]"
+      "100%|██████████| 1000/1000 [00:00<00:00, 90558.42it/s]"
      ]
     },
     {
@@ -282,7 +275,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 40,
+   "execution_count": 11,
    "metadata": {},
    "outputs": [
     {
@@ -306,7 +299,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 41,
+   "execution_count": 12,
    "metadata": {},
    "outputs": [
     {
@@ -324,7 +317,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 42,
+   "execution_count": 13,
    "metadata": {},
    "outputs": [],
    "source": [
@@ -356,14 +349,15 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 43,
+   "execution_count": 14,
    "metadata": {},
    "outputs": [
     {
      "name": "stderr",
      "output_type": "stream",
      "text": [
-      "100%|██████████| 300/300 [00:01<00:00, 240.99it/s]"
+      "  0%|          | 0/300 [00:00<?, ?it/s]An NVIDIA GPU may be present on this machine, but a CUDA-enabled jaxlib is not installed. Falling back to cpu.\n",
+      "100%|██████████| 300/300 [00:03<00:00, 78.26it/s] "
      ]
     },
     {
@@ -389,7 +383,7 @@
   },
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    "cell_type": "code",
-   "execution_count": 44,
+   "execution_count": 15,
    "metadata": {},
    "outputs": [
     {
@@ -413,7 +407,7 @@
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-   "execution_count": 45,
+   "execution_count": 16,
    "metadata": {},
    "outputs": [
     {
@@ -431,7 +425,7 @@
   },
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    "cell_type": "code",
-   "execution_count": 46,
+   "execution_count": 17,
    "metadata": {},
    "outputs": [],
    "source": [
@@ -467,14 +461,14 @@
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    "cell_type": "code",
-   "execution_count": 47,
+   "execution_count": 18,
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      "text": [
-      "  1%|          | 1/100 [00:00<00:19,  5.19it/s]"
+      "  1%|          | 1/100 [00:00<00:52,  1.90it/s]"
      ]
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@@ -500,7 +494,7 @@
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    "cell_type": "code",
-   "execution_count": 48,
+   "execution_count": 19,
    "metadata": {},
    "outputs": [
     {
@@ -524,7 +518,7 @@
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    "cell_type": "code",
-   "execution_count": 49,
+   "execution_count": 20,
    "metadata": {},
    "outputs": [
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@@ -549,7 +543,7 @@
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+   "execution_count": 21,
    "metadata": {},
    "outputs": [
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@@ -575,7 +569,7 @@
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-   "execution_count": 51,
+   "execution_count": 22,
    "metadata": {},
    "outputs": [],
    "source": [
@@ -585,14 +579,14 @@
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-   "execution_count": 52,
+   "execution_count": 23,
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-      "  2%|▏         | 2/100 [00:00<00:02, 39.91it/s]"
+      "  2%|▏         | 2/100 [00:00<00:29,  3.31it/s]"
      ]
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@@ -618,7 +612,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 53,
+   "execution_count": 24,
    "metadata": {},
    "outputs": [
     {