Highlights
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PyPOTS Public
Forked from WenjieDu/PyPOTSA Python toolkit/library for reality-centric machine/deep learning and data mining on partially-observed time series, including SOTA neural network models for scientific analysis tasks of imputatio…
Python BSD 3-Clause "New" or "Revised" License UpdatedAug 19, 2024 -
TSDB Public
Forked from WenjieDu/TSDBa Python toolbox loads 172 public time series datasets for machine/deep learning with a single line of code. Datasets from multiple domains including healthcare, financial, power, traffic, weather,…
Python BSD 3-Clause "New" or "Revised" License UpdatedAug 15, 2024 -
vitessce-python Public
Forked from vitessce/vitessce-pythonPython API and Jupyter widget for Vitessce
Python MIT License UpdatedAug 7, 2024 -
seurat Public
Forked from satijalab/seuratR toolkit for single cell genomics
R Other UpdatedJul 29, 2024 -
CommonDataModel Public
Forked from OHDSI/CommonDataModelDefinition and DDLs for the OMOP Common Data Model (CDM)
HTML UpdatedJul 22, 2024 -
scanpy Public
Forked from scverse/scanpySingle-cell analysis in Python. Scales to >1M cells.
Python BSD 3-Clause "New" or "Revised" License UpdatedJul 1, 2024 -
ellis-summerschool Public
Forked from BaileyAndrew/ellis-summerschoolJupyter Notebook MIT License UpdatedJun 9, 2024 -
fknni Public
Forked from Zethson/fknniLightning fast KNN imputation
Python Apache License 2.0 UpdatedJun 7, 2024 -
ehrapy Public
Forked from theislab/ehrapyElectronic Health Record Analysis with Python.
Python Apache License 2.0 UpdatedApr 29, 2024 -
ehrapy-tutorials Public
Forked from theislab/ehrapy-tutorialsTutorials for ehrapy
Jupyter Notebook Apache License 2.0 UpdatedApr 19, 2024 -
scverse-tutorials Public
Forked from scverse/scverse-tutorialsTutorials for learning scverse
Python BSD 3-Clause "New" or "Revised" License UpdatedMar 28, 2024 -
anndata Public
Forked from scverse/anndataAnnotated data.
Python BSD 3-Clause "New" or "Revised" License UpdatedMar 5, 2024 -
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pertpy Public
Forked from scverse/pertpyPerturbation Analysis in the scverse ecosystem.
Python MIT License UpdatedJan 14, 2024 -
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pertpy-tutorials Public
Forked from scverse/pertpy-tutorialsJupyter Notebook Apache License 2.0 UpdatedSep 26, 2023 -
mudata Public
Forked from scverse/mudataMultimodal Data (.h5mu) implementation for Python
Python BSD 3-Clause "New" or "Revised" License UpdatedSep 21, 2023 -
single-cell-best-practices Public
Forked from theislab/single-cell-best-practiceshttps://www.sc-best-practices.org
Jupyter Notebook Other UpdatedSep 13, 2023 -
imbalanced-learn Public
Forked from scikit-learn-contrib/imbalanced-learnA Python Package to Tackle the Curse of Imbalanced Datasets in Machine Learning
Python MIT License UpdatedSep 7, 2023 -
squidpy Public
Forked from scverse/squidpySpatial Single Cell Analysis in Python
Python BSD 3-Clause "New" or "Revised" License UpdatedSep 4, 2023 -
cellrank Public
Forked from theislab/cellrankCellRank: dynamics from multi-view single-cell data. See the docs:
Python BSD 3-Clause "New" or "Revised" License UpdatedAug 29, 2023 -
scvi-tools Public
Forked from scverse/scvi-toolsDeep probabilistic analysis of single-cell omics data
Python BSD 3-Clause "New" or "Revised" License UpdatedJan 20, 2023 -
PathomicFusion Public
Forked from mahmoodlab/PathomicFusionFusing Histology and Genomics via Deep Learning - IEEE TMI
Jupyter Notebook GNU General Public License v3.0 UpdatedAug 22, 2022 -
CoMP Public
Forked from BenevolentAI/CoMPCoMP: Contrastive Mixture of Posteriors
Python MIT License UpdatedJul 18, 2022 -
simbsig Public
Forked from BorgwardtLab/simbsigThe official implementation for the SIMBSIG package
Python BSD 3-Clause "New" or "Revised" License UpdatedJul 7, 2022 -
muon-tutorials Public
Forked from scverse/muon-tutorialsTutorials for multimodal omics data analysis
Jupyter Notebook BSD 3-Clause "New" or "Revised" License UpdatedJun 27, 2022 -
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Einfache Graphische Darstellung der neugemeldeten SARS-COV2 Infektionen der Kantone
R UpdatedSep 18, 2020