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1. prep-LaSSO prep-LaSSO Public

   Prepare input files for LaSSO software (https://github.com/dbitton/LaSSO.git)

   Python 1

2. GenomicScripts GenomicScripts Public

   Simple Genomic Scripts

3. 2014-5-metagenomics-workshop 2014-5-metagenomics-workshop Public

   Forked from inodb/2014-5-metagenomics-workshop

   Metagenomics Workshop 2014-5-21 to 2014-5-23 at SciLifeLab, Stockholm

   Python

4. NetworkAnalysis NetworkAnalysis Public

   Network analysis and visualization with Cytoscape and STRING

5. rnaseq-de-tutorial rnaseq-de-tutorial

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   # Differential expression analysis with edgeR

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   This is a tutorial I have presented for the class Genomics and Systems Biology at the University of Chicago.

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   In this course the students learn about study design, normalization, and statistical testing for genomic studies.

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   This is meant to introduce them to how these ideas are implemented in practice.