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Added web-version
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@ggirelli
ggirelli committed Jun 10, 2019
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163 changes: 163 additions & 0 deletions spectrascope-web/app-model.html
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<!DOCTYPE html>
<html>
<head>
<title>SpectraScope</title>

<!--jQuery-->
<script src="https://code.jquery.com/jquery-3.3.1.min.js" crossorigin="anonymous"></script>

<!--Bootstrap-->
<link rel="stylesheet" href="https://stackpath.bootstrapcdn.com/bootstrap/4.3.1/css/bootstrap.min.css" integrity="sha384-ggOyR0iXCbMQv3Xipma34MD+dH/1fQ784/j6cY/iJTQUOhcWr7x9JvoRxT2MZw1T" crossorigin="anonymous">
<script src="https://cdnjs.cloudflare.com/ajax/libs/popper.js/1.14.7/umd/popper.min.js" integrity="sha384-UO2eT0CpHqdSJQ6hJty5KVphtPhzWj9WO1clHTMGa3JDZwrnQq4sF86dIHNDz0W1" crossorigin="anonymous"></script>
<script src="https://stackpath.bootstrapcdn.com/bootstrap/4.3.1/js/bootstrap.min.js" integrity="sha384-JjSmVgyd0p3pXB1rRibZUAYoIIy6OrQ6VrjIEaFf/nJGzIxFDsf4x0xIM+B07jRM" crossorigin="anonymous"></script>

<!--BoostratpToggle-->
<link href="https://cdn.jsdelivr.net/gh/gitbrent/bootstrap4-toggle@3.4.0/css/bootstrap4-toggle.min.css" rel="stylesheet">
<script src="https://cdn.jsdelivr.net/gh/gitbrent/bootstrap4-toggle@3.4.0/js/bootstrap4-toggle.min.js"></script>

<!--FontAwesome-->
<script defer src="https://use.fontawesome.com/releases/v5.8.2/js/all.js" integrity="sha384-DJ25uNYET2XCl5ZF++U8eNxPWqcKohUUBUpKGlNLMchM7q4Wjg2CUpjHLaL8yYPH" crossorigin="anonymous"></script>

<!--D3-->
<script src="https://d3js.org/d3.v4.min.js"></script>

<!--GoogleFonts-->
<link href="https://fonts.googleapis.com/css?family=Baloo+Bhai|Roboto:300" rel="stylesheet">

<link rel="stylesheet" href="css/main.css">

<script type="text/javascript" src="https://cdn.jsdelivr.net/gh/ggirelli/wave2color/src/get_color.js" crossorigin="anonymous"></script>
<script src="js/main-model.js"></script>
</head>
<body>
<div class="row">
<header class="mt-5 mb-5 col col-10 offset-1">
<h1 class="text-center"><i class="fas fa-ghost"></i> SpectraScope <i class="fas fa-microscope" onClick="javascript:wave=prompt('Insert wavelength (in nm) or \'reset\' to reset.');color = wave == 'reset' ? 'white' : get_color(wave); $('body').css('background-color', color);"></i> Model <i class="fas fa-wave-square"></i></h1>

<ul class="nav justify-content-end">
<li class="nav-item"><a class="nav-link" href="app.html"><i class="fas fa-home"></i> Home</a></li>
<li class="nav-item"><a class="nav-link disabled" href="#"><i class="fas fa-wave-square"></i> Model</a></li>
</ul>
</header>
<article class="col col-10 offset-1"><div class="row">

<div class="col col-12 mb-4">
<div class="container">
<p>Click one of each source/ex-filter/em-filter/fluorophore (from <i class="fas fa-sign-in-alt"></i>) to add them to the graph. Click on the selected features (from <i class="far fa-hand-pointer"></i>) to remove them from the graph. <b>Hover over</b> a spectrum to visualize a short description below this paragraph. <b>Click</b> on a spectrum to visualize the raw data at the end of the page.</p>

<small><b>Notice!</b> This interface has been developed for GoogleChrome (v74) and FireFox (v66). Thus, it may not be fully compatible with other browsers (e.g., Safari, IExplorer,...).</small>

<input id="short-details" class="form-control mt-3" type="text" placeholder="Move over a spectrum with the mouse to see its details here." disabled />
</div>
</div>

<div id="page-content" class="col-12 mb-4">
<div class="card">
<div class="card-body">
<p><small>Mouse coordinates (wavelength, relative intensity): <span id="mouse-coords">...</span></small></p>
<div id="d3wrapper">
<svg></svg>
</div>
<div class="alert alert-light mb-0"><input type="checkbox" id="model-trigger" name="model-trigger" data-toggle="toggle" data-size="sm" data-onstyle="info" /> <label onclick="$('#model-trigger').bootstrapToggle('toggle')">Model source/fluorophore intensity through the selected filters.</label><br /><small>You must select one of each of source, excitation/emission fitler, and fluorophore to be able to model the spectra throught the optical configuration.</small></div>
</div>
</div>
</div>

<div id="selection" class="col-12 mb-3">
<div class="row">
<div class="col col-3">
<div class="card mb-1">
<div class="card-header text-right">Selected Source <i class="far fa-lightbulb"></i></div>
<div class="card-body sources selection">
<a class="btn btn-block btn-light disabled">unselected</a>
</div>
</div>
</div>
<div class="col col-3">
<div class="card mb-1">
<div class="card-header text-right">Selected Excitation Filter <i class="fas fa-filter"></i></div>
<div class="card-body ex-filters selection">
<a class="btn btn-block btn-light disabled">unselected</a>
</div>
</div>
</div>
<div class="col col-3">
<div class="card mb-1">
<div class="card-header text-right">Selected Fluorophore <i class="fas fa-tint"></i></div>
<div class="card-body fluorophores selection">
<a class="btn btn-block btn-light disabled">unselected</a>
</div>
</div>
</div>
<div class="col col-3">
<div class="card mb-1">
<div class="card-header text-right">Selected Emission Filter <i class="fas fa-filter"></i></div>
<div class="card-body em-filters selection">
<a class="btn btn-block btn-light disabled">unselected</a>
</div>
</div>
</div>
</div>
<p class="mb-1"><small><i class="far fa-hand-pointer"></i> Click on a selected feature to remove it from the current selection.</small></p>
</div>

<div id="input" class="col-12 mb-4">
<div class="card">
<div class="card-header"><i class="fas fa-sign-in-alt"></i> Input</div>
<div class="card-body">

<div class="accordion" id="accordion-settings">
<div class="card">
<div class="card-header" id="headingOne"><h2 class="mb-0">
<button class="btn btn-link collapsed btn-block text-left text-dark" type="button" data-toggle="collapse" data-target="#sources" aria-expanded="true" aria-controls="sources"><i class="fa fa-lightbulb"></i> Sources</button>
</h2></div>
<div id="sources" class="sources collapse" aria-labelledby="headingOne" data-parent="#accordion-settings"><div class="card-body">
<small>Click to add to current selection.</small>
<div class="input option-list"></div>
</div></div>
</div>
<div class="card">
<div class="card-header" id="headingOne"><h2 class="mb-0">
<button class="btn btn-link collapsed btn-block text-left text-dark" type="button" data-toggle="collapse" data-target="#ex-filters" aria-expanded="true" aria-controls="ex-filters"><i class="fas fa-filter"></i> Excitation Filters</button>
</h2></div>
<div id="ex-filters" class="ex-filters collapse" aria-labelledby="headingOne" data-parent="#accordion-settings"><div class="card-body">
<small>Click to add to current selection.</small>
<div class="input option-list"></div>
</div></div>
</div>
<div class="card">
<div class="card-header" id="headingTwo"><h2 class="mb-0">
<button class="btn btn-link collapsed btn-block text-left text-dark" type="button" data-toggle="collapse" data-target="#fluorophores" aria-expanded="false" aria-controls="fluorophores"><i class="fas fa-tint"></i> Fluorophores</button>
</h2></div>
<div id="fluorophores" class="fluorophores collapse" aria-labelledby="headingTwo" data-parent="#accordion-settings"><div class="card-body">
<small>Click to add to current selection.</small>
<div class="input option-list"></div>
</div></div>
</div>
<div class="card">
<div class="card-header" id="headingOne"><h2 class="mb-0">
<button class="btn btn-link collapsed btn-block text-left text-dark" type="button" data-toggle="collapse" data-target="#em-filters" aria-expanded="true" aria-controls="em-filters"><i class="fas fa-filter"></i> Emission Filters</button>
</h2></div>
<div id="em-filters" class="em-filters collapse" aria-labelledby="headingOne" data-parent="#accordion-settings"><div class="card-body">
<small>Click to add to current selection.</small>
<div class="input option-list"></div>
</div></div>
</div>
</div>

</div>
</div>
</div>

<div class="col col-12"><div class="container">
<textarea class="form-control" name="extended_details" id="extended_details" cols="30" rows="10" disabled></textarea><small>Click on a portion of the spectra to see its extensive details here.</small>
</div></div>

</article>
<footer class="mt-5 col col-10 offset-1 text-center">
<p>Gabriele Girelli &copy; 2019 | <a href="https://ggirelli.github.io/SpectraScope/"><i class="fas fa-question-circle"></i></a> | <a href="https://github.com/ggirelli/SpectraScope"><i class="fab fa-github"></i></a> | <a href="https://github.com/ggirelli/SpectraScope/issues">Feedback</a></p>
<p><small>Powered by: <a href="https://jquery.com/">jQuery</a>, <a href="https://d3js.org/">D3.js</a>, <a href="https://fontawesome.com">Font Awesome</a>, <a href="https://getbootstrap.com/docs/4.3/">Bootstrap v4.3</a>, <a href="https://fonts.google.com/">Google Fonts</a></small></p>
</footer>
</div>
</body>
</html>
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