Minor fix to fasta output.

ggirelli · Apr 4, 2018 · 02f2993 · 02f2993
1 parent 25e5e89
commit 02f2993
Showing 1 changed file with 3 additions and 4 deletions.
diff --git a/bin/melt_duplex b/bin/melt_duplex
@@ -220,11 +220,10 @@ else:
                 fields = dict(re.findall(r'(tm):(.*?);', record.description))
                 if "tm" in fields.keys():
                     record.description = re.sub(r'(tm):(.*?);',
-                        'tm=%.2f;' % output[4], record.description)
-                    print(">%s\n%s" % (record.description, record.seq))
+                        'tm:%.2f;' % output[4], record.description)
                 else:
-                    print(">%s tm:%.2f;\n%s" % (
-                        record.description, output[4], record.seq))
+                    record.description += " tm:%.2f;" % output[4]
+                print(record.format("fasta").strip())
             else:
                 print("%s\t%f\t%f\t%f\t%f\t%s" % output)